Haemaphysalis longicornis (longhorned tick): 144170548
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Entry
144170548 CDS
T11551
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
hlg Haemaphysalis longicornis (longhorned tick)
Pathway
hlg03030
DNA replication
hlg03410
Base excision repair
hlg03420
Nucleotide excision repair
hlg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hlg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
144170548
03410 Base excision repair
144170548
03420 Nucleotide excision repair
144170548
03430 Mismatch repair
144170548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hlg03032
]
144170548
03036 Chromosome and associated proteins [BR:
hlg03036
]
144170548
03400 DNA repair and recombination proteins [BR:
hlg03400
]
144170548
DNA replication proteins [BR:
hlg03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
144170548
DNA Replication Termination Factors
ELG1-RFC complex
144170548
Chromosome and associated proteins [BR:
hlg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
144170548
DNA repair and recombination proteins [BR:
hlg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
144170548
Check point factors
HRAD17(Rad24)-RFC complex
144170548
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_lid_RFC1
AAA_16
AAA_22
AAA_11
SLFN-g3_helicase
AAA_assoc_2
Mg_chelatase
AAA_30
RuvB_N
AAA_24
DNAX_ATPase_lid
DUF815
ResIII
AAA_14
AAA_7
bpMoxR
AAA_28
AAA_5
AAA_19
nSTAND3
AAA_3
AAA_2
RNA_helicase
AAA_18
Gp44_lid
Hda_lid
Motif
Other DBs
NCBI-GeneID:
144170548
NCBI-ProteinID:
XP_077556532
LinkDB
All DBs
Position
Unknown
AA seq
358 aa
AA seq
DB search
MHAFLKSANPNLVLPKEKNKEPKPAAKKPAHIPWVEKYRPKTVDDVAHQDEVVSVLKKSL
QGADLPNLLFYGPPGTGKTSTILALARELFGDMYKSRILELNASDERGIQVVREKIKSFS
QLTANATGPDGKPCPPFKIIILDEADSMTASAQAALRRTMEKETKTTRFCLICNYISRII
DPLTSRCSKFRFKPLPKEVLIQRLRSICTTEGVQCDDEVLNFLMDACEGDMRRAITLFQS
VSRLKCGEPVSSQDVAEVAGIIPKSWIDDLLASCASNSYEKLSTTVEDLVLEGFAASQLF
NQLHDAIVLSSKYNDQQKSAIAEKLAICDHRLLEGADEFLQIMDLCVTIMSQVCNVQH
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcttttttgaaatcggccaacccaaacttggttcttcctaaagaaaaaaataag
gaaccgaagccagcagccaagaaacccgcgcacattccatgggtagaaaaataccggcca
aagactgtagacgatgtggctcaccaagatgaagttgtctcagtcctcaagaaatcactt
cagggagcggatctccccaatctgctgttctatggaccgcctggaacaggaaagacttct
accatactcgcattggcgcgggagcttttcggggacatgtacaagagccgcattctggag
ctcaacgcttctgatgaacgtggcatccaagttgtccgagagaaaattaagagcttctcc
caactcacagcgaatgctacaggaccagatggtaaaccgtgtccaccattcaagataata
atcctggacgaagccgactccatgacagcaagtgctcaggctgcccttcgtcgtaccatg
gagaaagaaacaaagaccacacgtttctgtcttatttgcaattacatcagcaggatcata
gaccccctgacgtcccgctgctcaaagtttcgcttcaagcccctgcccaaggaagtactc
atacagcgcctgcgcagcatctgcactactgagggtgtccaatgtgacgacgaggtgctg
aacttcttgatggatgcctgtgagggagacatgcggagagccataaccctgttccagagt
gtctcccgactcaagtgtggtgagcctgtgagctcgcaggatgtggctgaagtagcaggg
atcatcccaaaatcctggatcgatgacttgcttgccagctgtgcttcaaattcatatgaa
aaactgagcaccacagttgaggacctggtgctcgagggctttgcagcctcccaacttttc
aaccagctccacgacgccattgtgttgagcagcaagtacaacgaccagcagaagtccgcc
attgctgaaaaactggccatttgtgaccaccggctgcttgaaggtgccgacgagttcctt
caaataatggacttgtgtgtaacaatcatgagccaagtttgcaacgtgcagcattag
DBGET
integrated database retrieval system
