KEGG   Halobacillus litoralis: HLI_01310
Entry
HLI_01310         CDS       T05828                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
hli  Halobacillus litoralis
Pathway
hli03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hli00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HLI_01310 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hli03019]
    HLI_01310 (rny)
Messenger RNA biogenesis [BR:hli03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     HLI_01310 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B UPF0242 KH_2 DUF4407
Other DBs
NCBI-ProteinID: QAS50929
UniProt: A0A410M899
LinkDB
Position
complement(245448..247010)
AA seq 520 aa
MDMISSLIFILLALIIGSVVGYLIRKSIAEAKISSAEELAKQIVDEGHRNAESAKKEALL
EAKEENQKFRQEAENEIRDRRMELQKTENRLTQKEENLDRKSGTLDQRDLSLEKKEGTLA
ERQQQIEEMESKVKAMLQEQQTELERVSGLTSDQAKQMILERVEQEVSHESALMVKEAEN
RAKEEADKKAKSILSLALQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVILSGFDPIRRETARMALEKLVQDGRIHPARIEEMVDKSRREVDDYIR
EVGEQTTFEVGVHGLHPDLIKILGRLKYRTSYGQNVLKHSTEVAYLAGLLAAELGEDETL
ARRAGLLHDIGKAIDHEVEGSHVEIGKELAMKYKENETVINAVASHHGDEEPTSIISVLV
AAADALSAARPGARSETLENYIKRLEKLEEISESYEGVEKSFAIQAGREVRIMVRPDEID
DLEATRLARDIRNRIEGELDYPGHIKVTVIRETRSVEYAK
NT seq 1563 nt   +upstreamnt  +downstreamnt
atggatatgatatcctcgctcatcttcattttgcttgcccttatcatcggttctgttgtt
ggttatcttattcggaaatcgattgcggaggcgaaaatttcaagtgctgaagaacttgcg
aaacagattgttgatgaaggtcatcgcaatgcagaatcagcaaagaaagaggctcttctt
gaagcgaaggaagagaatcagaaatttcgtcaagaagcggagaacgagattcgtgaccgc
cgcatggaactgcagaaaactgaaaatcgtttgactcagaaagaagagaatctcgatcgt
aagagtggtacgcttgaccagcgtgatctttcactcgaaaagaaagaaggtactcttgcc
gagagacaacaacaaattgaagaaatggaaagcaaagtgaaagctatgcttcaagaacaa
caaacagagcttgaacgcgtatcaggcttaacatcagaccaggcgaaacaaatgatttta
gaacgagttgaacaagaggtgtctcatgagtcagcccttatggtcaaagaagcggaaaat
cgggctaaagaagaggcggacaagaaagcgaaaagcattctttcactagccttgcagcgt
tgtgctgcagaccacgttgctgaaacgacggtttctgtagtcaacctgccgaacgatgag
atgaaaggccgaatcatcggccgtgaaggtcgtaatatccgtacattagaaacgttgact
gggattgatttaattattgacgataccccggaagctgtcattctttcaggcttcgatcca
attcgccgtgaaactgcgcgaatggcccttgaaaaactcgttcaggatggacgtattcac
ccagctcgaattgaagagatggtggacaagtccaggcgtgaagtcgatgactatatacgt
gaagtaggggaacaaacgacatttgaagtgggagttcacgggttacacccggacctcatc
aagattcttggtcgcctgaagtatcgtacaagttatggacagaacgtcttaaaacactcg
accgaagttgcttatctagccgggttgctggctgctgagcttggcgaagacgaaacactt
gcccgacgcgcaggtttgcttcatgacatcggtaaagcgatcgaccatgaagtggaaggc
agccacgtagaaataggtaaagagttggctatgaagtacaaagaaaatgaaacagttatc
aacgctgttgcttctcaccatggtgatgaagagcctacatcaatcatttctgtcttggtc
gctgccgcagatgctctatctgctgctcgtccgggtgcgagaagtgaaactctggaaaat
tatatcaagcgtttagagaaacttgaagaaatatcagagtcttatgaaggagtagagaag
tccttcgctattcaagccggccgtgaagttcgaattatggttcgtcctgatgaaattgat
gatcttgaagctacaagattagcacgtgatattcgaaacagaatcgagggagaactcgat
tatccaggtcatattaaagttaccgtcattcgcgaaacacgttctgtggagtatgcgaaa
taa

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