Halobacillus litoralis: HLI_09590
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Entry
HLI_09590 CDS
T05828
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hli
Halobacillus litoralis
Pathway
hli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HLI_09590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hli03019
]
HLI_09590
03009 Ribosome biogenesis [BR:
hli03009
]
HLI_09590
Enzymes [BR:
hli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HLI_09590
Messenger RNA biogenesis [BR:
hli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HLI_09590
Ribosome biogenesis [BR:
hli03009
]
Prokaryotic type
rRNA helicases
HLI_09590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SUa-2TM
AAA_22
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
QAS52452
UniProt:
A0A410MCI6
LinkDB
All DBs
Position
complement(1875061..1876530)
Genome browser
AA seq
489 aa
AA seq
DB search
MTTFQSLGLSKPILKSLDTMGFEETTPIQEQTIPLGLEGKDVIGQAQTGTGKTAAFGIPM
LEKIDKQVKAVQGLVIAPTRELAIQVAEEMNRLGKGKGVRCLPIYGGSNMERQIRALKSN
DIVVATPGRLLDHIRRKTIKLQDVHTAVLDEADEMLNMGFIEDIRDILKALPEERQTLLF
SATMPKQIRDIATTLMKNPEEVKVKAKEMTVENIEQFFVEIPEKHKFDTLTRLLDIHDPA
LAIVFGRTKRRVDEVADGLQARGFSAEGIHGDLTQGKRMSTLNKFKRGRIEILVATDVAA
RGLDISEVSHVYNFDIPQDPESYVHRIGRTGRAGRKGESISFVTPREKDQLMLIEKLTKK
KVERLKVPSSEEAARGQQKVAVEKLTEMVQNNDLKNYKQAANELLEQNESTDLIAAALKM
MTKERSEVPVRLSSVQPISVKGAQRDKGNKKGGYRGGGGKRNFNSKNKSRNRNFNGKGGK
RGYQNKGRS
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
gtgacaacatttcaatcactaggattatcaaaacctatcctaaaatcattagacaccatg
ggttttgaagaaacgacaccaatacaagaacaaacgatccctctaggactagaagggaag
gacgtcattggccaggcccaaacaggtacagggaagacggctgcattcggtattccgatg
ctcgaaaaaatcgataaacaagtgaaggccgttcaaggtcttgtcatcgccccgacaagg
gaactggctattcaagtagctgaagaaatgaaccgtctgggtaaaggaaaaggcgttcgc
tgcctgccgatttatggcgggtctaacatggaacgtcaaatccgtgcacttaagagcaac
gatattgtcgtggcaacccctggacgtttgcttgaccacattcgtcgtaaaacgatcaaa
ttgcaagatgttcataccgctgtattagacgaagcggatgaaatgctgaacatgggattc
atcgaggatatccgtgatattttgaaagcactgccggaagagcgccaaacattgcttttc
tctgcaacaatgccgaaacagatccgtgatatcgctacaacattgatgaaaaaccctgaa
gaagtaaaagtgaaagcgaaagaaatgacagtcgaaaacatcgagcagttctttgtggaa
attcctgaaaagcacaagttcgatacattgacgcgtcttcttgatattcacgaccctgcg
ttagcgatcgtattcggtcgtacaaaacgccgtgtggatgaagtcgctgacggattacaa
gcccgtggcttcagtgcagaaggtatccacggagacttgactcaaggtaagcgtatgagc
acgttgaacaaattcaaacgtggccgtatcgaaatccttgtagcgacagacgtagctgca
cgtggtttggatatctctgaagtttcacacgtgtataacttcgatatcccgcaagacccg
gaaagttatgtacaccgaatcggccgtacaggacgtgcgggtcgtaaaggtgaatcgatc
tcttttgttaccccacgtgaaaaagatcagcttatgttgattgaaaaactgacgaagaag
aaagtagaacgcctgaaagttccttcttctgaagaagcagcacgcggtcaacaaaaagtc
gctgttgagaagttgacagaaatggttcagaacaacgacttgaagaactacaaacaagca
gcgaacgagttgcttgagcagaatgaatctacagatcttattgcagcagcattgaagatg
atgacgaaggaacgcagtgaagtgcctgtacgtttatcctccgttcaaccgatcagcgtt
aaaggtgcgcagcgcgataaaggcaacaaaaaaggcggctaccgcggaggcggcggcaaa
cgcaacttcaatagcaaaaataaatcccgtaaccgtaacttcaacggtaaaggcggtaag
cgcgggtaccaaaataaaggtcgcagctaa
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