KEGG   Halobacillus litoralis: HLI_13270
Entry
HLI_13270         CDS       T05828                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
hli  Halobacillus litoralis
Pathway
hli03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:hli00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    HLI_13270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hli03400]
    HLI_13270
DNA repair and recombination proteins [BR:hli03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     HLI_13270
SSDB
Motif
Pfam: Ku DUF2095 Rad50_zn_hook CDC24_OB3 DUF6058 Prok-RING_4 zf-C3HC4_3
Other DBs
NCBI-ProteinID: QAS53086
UniProt: A0A410MEN3
LinkDB
Position
2575678..2576514
AA seq 278 aa
MHTMWKGTISFGLVNIPVKLHAATENKDIKLRQLHQECNSPVEYKKRCPVCDREIESEEI
VKAYEYAKNKFVVLDEEDLEELKKEQADKAVEILDFVKLEEIDPIYFERSYYISPSEGGS
KAYGLLRQALGDTGKIGVAKIIIRSKEQLAIVRVYENTLLMETIHFPDEVRHVQDVPNVP
EEAELSKKELSTAVTLIDQLTAEFDPEKYKDEYRTALLDLIEAKKNNEEVTTAKDKPKPD
NVTDLMDALEKSLEKTKGNKKKKTTKRKTTTSGKKKSS
NT seq 837 nt   +upstreamnt  +downstreamnt
atgcacaccatgtggaagggtacgatcagtttcggccttgtcaatataccagtgaagcta
cacgctgctaccgaaaataaagacattaagctccgtcagcttcatcaagaatgcaactcc
cctgtggagtataaaaagcgctgtccggtatgtgatcgggaaatcgaaagtgaagaaatc
gtcaaagcttatgaatatgcaaaaaataagtttgttgtgttagacgaggaagacctggaa
gaattgaagaaagaacaggcagataaagcagtggagatcctcgactttgttaaattagaa
gaaatcgatcccatttactttgaacgcagttactatatttcaccgagtgaaggtgggtcc
aaagcgtatgggctgttacgtcaagcgttaggagatacagggaaaatcggggtcgccaaa
atcatcatacgatcaaaggaacaattggcgattgtccgtgtctatgaaaacactcttctg
atggagactatccattttcctgatgaagtacgccacgttcaggatgtaccgaatgtcccg
gaagaagcagaattgagtaaaaaagaattgagcacggccgtcactttgatcgatcaattg
acagcagagttcgacccagagaaatataaagatgaatacagaacagctttactggatttg
attgaagcgaagaaaaataatgaggaagttacgacagcgaaagataagccaaagccagac
aacgtgacagatctcatggatgcgcttgagaaatcgttagaaaaaacaaaaggaaacaaa
aagaagaaaacaaccaaacggaaaacgacaacttccggcaaaaagaaatcctcataa

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