Halobacillus litoralis: HLI_13730
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Entry
HLI_13730 CDS
T05828
Name
(GenBank) ATP-dependent helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hli
Halobacillus litoralis
Pathway
hli03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hli00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HLI_13730
09124 Replication and repair
03420 Nucleotide excision repair
HLI_13730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hli03021
]
HLI_13730
03036 Chromosome and associated proteins [BR:
hli03036
]
HLI_13730
03400 DNA repair and recombination proteins [BR:
hli03400
]
HLI_13730
Enzymes [BR:
hli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
HLI_13730
Transcription machinery [BR:
hli03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HLI_13730
Chromosome and associated proteins [BR:
hli03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
HLI_13730
DNA repair and recombination proteins [BR:
hli03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HLI_13730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
PDDEXK_1
HBB
ResIII
PhoH
Motif
Other DBs
NCBI-ProteinID:
QAS53172
UniProt:
A0A410MEL1
LinkDB
All DBs
Position
2675297..2677573
Genome browser
AA seq
758 aa
AA seq
DB search
MEKRVTISVRELVSYVYRGGSIDERFQSNTALVEGTAIHQEVQGKYKEEDEKEVFLQYEF
DQDGISLNIQGRCDGLLRTDEGVVIDEIKSTARELEEIDEHSHPVYWAQAKGYAFMYATQ
QQLQHIEVQLTYVQKSTKEKKRFQQRFTHQELAMFMDETIAVYSSYAKILLYIREQKEKT
IPELGFPFPNYREGQRKLAGSVYHTIEEKRNLFAQAPTGIGKTISTLFPAIKALQLEGTE
RIYYLTAKTVTRATAEEALSKMKELGLQLRSVTLTAKDKICFQEETICQPEYCMFADGYY
DRINGAIIDILINETQMTRSVLEEYARKHRVCPFEFSLDLTDVVDVVIGDYNYVFDPRVS
LKRLLPEKKKKTALLVDEAHNLVERARDMYSAVIHKHSFQAILDEWGSDNGKLLKSASAI
VKDLERIHLNGGSHRKLDDIPGELEENIERFISAAEAILQEEAVGEQSEALLDVYFQSQN
FVKILELVDDHYRYIGESVNDDFTLKLFCLDPSHVLRQTTKSFRTSVFFSATLSPFAYYK
EMLGGTKDDYILQLPSPYEASQIDVMITPLSTRYKSREQTARQLVERLQHQAVEHPGNHL
FFFPSYHYMEMVYHEFRNTSDLDAVMQEKGMNEDRREDFLAQFVEGGRLIGFAVLGGIFS
EGVDLRGDRLNGVAVVGIGLAPRSFEKELIKEYFNQKGRSGYDYSYVFPGMNKVLQAGGR
LIRSEEDSGAIQLVDDRFLSRKYMQLLPEDWGNYRILR
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacgtgtcacaatatctgttcgtgagctagtttcatatgtatatcggggagga
agtattgatgaaaggtttcaatcaaacacagctttagttgaaggcacagcgatacatcag
gaagtgcaagggaaatataaagaggaggatgaaaaagaggtatttttgcaatacgagttt
gaccaagatgggatatccttgaatattcaagggcgttgtgatgggctcttacggactgat
gaaggggttgtgatcgatgaaataaaatcgactgcacgagaacttgaggaaattgatgaa
catagccatcccgtatactgggctcaagcaaaaggatatgctttcatgtacgccacccaa
cagcaacttcaacatatcgaggttcagttgacttatgttcagaaaagcacgaaagagaaa
aaaaggtttcaacaaaggtttacgcatcaagaactggcaatgtttatggatgagacgatt
gctgtgtattcatcgtatgcaaagatccttctatatatccgggagcaaaaggaaaagaca
atacctgaattgggtttcccttttccaaattatcgggaaggtcaaagaaaacttgcgggg
agcgtttaccataccatcgaagaaaaaagaaacttattcgctcaagcccctacagggata
ggaaaaactatctctacactcttcccagccattaaggcattgcagttagaagggacggag
cgtatatattatttgactgccaaaacggtcacacgggctacggcagaagaagccttgtcg
aagatgaaagaactcgggttacaactcaggtctgttactttaacagctaaggataagatt
tgttttcaagaagaaacgatttgtcagcctgaatactgtatgtttgcagatggatattat
gatcgtataaacggagccatcatcgatattctcattaatgaaacacaaatgactcgctct
gtcctagaggaatatgcacggaagcatcgtgtatgcccatttgaattttctcttgatttg
acagatgtggttgatgtcgtaatcggagattataattatgtttttgacccaagagtttca
ttgaagcgccttctgcctgagaagaagaaaaaaactgccctcctggtcgatgaggctcat
aatctggttgaaagagcccgtgatatgtattcagctgtcattcataaacattcttttcaa
gctattcttgacgaatgggggagtgataatgggaagttgttaaaaagtgcaagcgcgata
gtcaaagacctggagcgaattcacttgaatggcgggtcacacaggaaacttgatgatatt
cctggagaattggaagagaatattgaaaggttcatttcagcagcagaagctatattgcag
gaagaagcggtaggtgagcagtctgaggcgttactcgatgtgtatttccagtcccagaac
tttgttaagattcttgaattagtcgatgatcattatcgttatataggagaaagtgtgaat
gatgatttcaccttaaagttattttgtcttgatccttctcatgtattgcgtcaaacgaca
aagtcttttcgtaccagtgtttttttctctgccacattatctcctttcgcttattacaaa
gagatgctgggaggaacgaaggatgattatatattgcaactcccatcaccatatgaagcc
tctcaaatagatgtgatgatcaccccgctctccactcggtataagtctagggaacagaca
gctcgccaattagttgaaaggctccagcatcaagcggtcgaacatcctggaaaccattta
tttttctttccctcctatcactatatggagatggtctatcatgaatttcgtaacacatca
gatttggatgcagtcatgcaggaaaaagggatgaatgaggacaggagagaagattttctg
gctcaatttgttgagggagggcgcttgatcggttttgctgttttaggcggtattttctct
gaaggagtggatttaaggggagatcgtctgaacggtgtggctgtggtcggtatagggctt
gcgccaaggagctttgaaaaagaactgattaaagagtatttcaatcaaaaaggcagaagc
ggttatgattattcgtatgtgttcccaggtatgaataaagtacttcaggcaggtggaaga
ttaatacgttccgaggaggactccggagctatacagcttgtagatgaccgttttctatcc
cggaagtatatgcaactcctcccagaagactggggaaattatcgaatattaaggtga
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integrated database retrieval system
