Halobacillus litoralis: HLI_14320
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Entry
HLI_14320 CDS
T05828
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
hli
Halobacillus litoralis
Pathway
hli03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hli00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HLI_14320 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hli03021
]
HLI_14320 (rpoE)
03400 DNA repair and recombination proteins [BR:
hli03400
]
HLI_14320 (rpoE)
Transcription machinery [BR:
hli03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HLI_14320 (rpoE)
DNA repair and recombination proteins [BR:
hli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HLI_14320 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HARE-HTH
BUD22
Drc1-Sld2
Motif
Other DBs
NCBI-ProteinID:
QAS53282
UniProt:
A0A410MEW2
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All DBs
Position
2813042..2813590
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AA seq
182 aa
AA seq
DB search
MSLKEFSQAQINEISMIELATIILEEEREAIDFNEIFRRIATMKKFNAKQKQEYIAQFYT
DMNIDGQFMTIGTNRWGLKRWYPVEQMEEEIASLPQKRKKKKKKRKKKPSKLLEEELGVS
EYDDTEEDGLEDDVELTDEDLDLDDNDDFEGDYDEDDLDEEEEEIVEDDISFIGDDDDEE
EK
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
gtgagcttaaaagaatttagccaagcccaaattaatgaaatctccatgattgaactggct
accattatattggaagaggaaagagaagccatcgattttaatgagattttccgccgtatt
gcgacgatgaagaaattcaatgccaaacaaaaacaagagtacatcgcccaattttacaca
gacatgaatatcgatgggcagttcatgacgatcggtacgaaccgctgggggcttaaacgc
tggtaccctgtagagcagatggaagaggaaattgccagcctcccacaaaaacgtaaaaag
aaaaagaaaaagaggaaaaagaaaccttccaagttgcttgaagaggaattgggcgtttct
gagtatgacgatacagaagaagatggtcttgaagatgatgtggaattaacggatgaagac
cttgaccttgatgataatgatgatttcgaaggtgactatgatgaggatgatctcgatgaa
gaagaggaagaaatagtcgaggatgatatcagcttcattggtgacgatgatgatgaagaa
gaaaaataa
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