Halobacillus litoralis: HLI_17925
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Entry
HLI_17925 CDS
T05828
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hli
Halobacillus litoralis
Pathway
hli03030
DNA replication
hli03430
Mismatch repair
hli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HLI_17925
03430 Mismatch repair
HLI_17925
03440 Homologous recombination
HLI_17925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hli03032
]
HLI_17925
03400 DNA repair and recombination proteins [BR:
hli03400
]
HLI_17925
Enzymes [BR:
hli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HLI_17925
DNA replication proteins [BR:
hli03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HLI_17925
DNA repair and recombination proteins [BR:
hli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HLI_17925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
POT1
Motif
Other DBs
NCBI-ProteinID:
QAS53951
UniProt:
A0A410MGW0
LinkDB
All DBs
Position
3574321..3577674
Genome browser
AA seq
1117 aa
AA seq
DB search
MTFTHLNVQSGYSLMNSTVKTRSLVQRAKELGFGAISLTDENTLSGAVSFYQECNNQGVK
PIIGLKTTVEDRSLLFPVIMLAKNSQGYRNLLKITTYVQTNATNISLEELGSRKDGLIVI
QMTASSPWADTIANRMFSRIDDSLIRWLDMFGEDHFYMSIQDRDLHAERQMHQPLQEWVE
SKGIRVVAIGDVRYLHSEDAAAYQCLRAIDEGARYSPQVNRSYQYLKSGEEMENFFGEWW
PEVLSATQEIVERCNLELNLNQQLLPAYPTPYGETPDAYLQDLCEKALVKKFGSEDEKAV
ERLSHELNVIQSMQFSDYFLIVWDFISYARKQGIHAGPGRGSAAGSIVAYLLDITQVDPL
KYGLLFERFLNPERVTMPDIDIDFPDYRRDEVIAYVSEKYGKDHVAQISTFGTFAARSVL
RELFKVLAVDESDASFILYQIPKNTSDTLIEIVKKSEELKDYIRNSDQLQFLFKIATKLE
GLPRHISTHAAGVVLSEEPLTEYTPLMNGQGDVHLTQMAMGDLEKIGLLKIDFLGLRNLS
FIEKLENTIRKYSKQKFSVKDLPLNDGKTFDLLKQGRTNGVFQLESKGMKGVLTRLKPSH
FEDVVAVNALYRPGPMDYIQDYIKRKHGNMEYGFPHPDLKGILGPTFGVLIYQEQIMQVA
RRVAGYSLGEADLLRRAISKKQGDIWSNERDKFIAGCKKKGYEESVATELFDWIVKFSNY
GFNRSHAVAYSLISYWLAFIKAHYPSHFLAELMNANIGDRDKGTIYIREAREMNVKVNAP
SINRSHILTRDDKGEIRMGLLAIKGLGYQAAQAIVDGRVDGPYKSLNDFCLRLDDKAVSR
SVIEALIISGAFDELHQNRASSLASIDQALEQGELFKEFQDQPGFFGTDIEMGMVEVDPF
PPLKELSMEKEVLGAYMSEHPLGHHRNALRSRGMISLYKADQLKSKRKLVTAVVLESFRE
IRTKRGDSMSFVTISDETAEMEAVLFPEAYRNVKPWLKEQMLVIAEGKIEERNNRKQMII
NQLKPFELSERENKAERRLFVKVTKDTEHTAIDKLKEAAEYFPGNTPVLIFRSEDRKIYH
LDQDYSLEVSRECLNMLNDFFGSQSVALRTQDKHMDV
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgacttttacccatttgaatgttcaaagcggctatagcctgatgaatagcacggtaaaa
acccgctcattggtgcagagggctaaagaattagggtttggtgcgatttctttgaccgat
gaaaacaccttgagcggcgcggtgtctttttatcaagaatgtaacaatcaaggtgtcaaa
ccaatcataggtttgaaaacaacggtcgaggatcgatctcttcttttccctgtgattatg
ttggctaaaaactcacagggatatcgaaatttattgaaaatcaccacttatgttcaaaca
aacgccacaaacatatctcttgaagaactgggttcacggaaagatggtttgatcgtcatc
caaatgactgcctcatcaccgtgggcagacaccatagctaatcggatgttttcaaggatt
gacgattcattgattcggtggttagacatgtttggagaagaccatttttatatgagtatt
caggatcgtgatttgcatgctgaacgacaaatgcatcagcctttgcaggaatgggtagaa
tctaaggggatccgtgtggttgctattggagatgtgcgttatttacatagcgaagacgca
gcagcttatcaatgtttgagagcaatcgatgaaggggctcgttacagcccgcaggttaac
cgcagctatcagtatttgaaatctggcgaggaaatggaaaatttctttggtgaatggtgg
ccggaagttttatcagccacacaagagattgtggagcgttgtaacttggaattgaacttg
aatcaacaactccttccagcttaccccaccccatatggcgaaaccccggatgcgtatttg
caagatttatgtgagaaggcattggtgaaaaaattcggatctgaagatgagaaagctgta
gagaggcttagtcacgagctgaatgtgattcaatcaatgcaattcagtgactattttctc
attgtctgggattttatatcctatgcaagaaagcaaggaattcatgcaggtccaggacgt
ggctctgcggctggttcgattgtcgcttatttattggatatcactcaagtagatccatta
aagtatggcttgttgtttgaacggttcttgaatcctgagcgtgttactatgccggatatt
gacattgatttccccgactatcgcagagatgaagtgatcgcatatgtgagtgaaaagtac
ggaaaagatcacgtagctcaaatcagtacatttgggacttttgctgcgaggagtgttttg
agggaattatttaaagttttggcggttgatgaaagtgatgcctccttcattctttatcaa
attcctaaaaataccagtgatacactaattgaaatcgtaaaaaagtcggaggaattgaaa
gattatatccgaaattcagatcagcttcagtttctctttaaaattgcgacaaagttggag
gggcttccgcgtcatatatcaacacacgcagcaggtgttgtattaagtgaagagccgtta
actgagtacactcctcttatgaatggccagggggacgttcatcttactcaaatggctatg
ggtgatttagaaaagatcggtttattgaaaattgattttctgggtctcaggaatctttcg
tttatagagaagttggaaaatacaatcaggaaatatagtaaacaaaagttttcagtgaaa
gatctccctcttaatgatgggaaaacattcgatttacttaaacaaggccgtacaaatggt
gtttttcaattagaatccaaaggaatgaaaggggttctaaccagacttaaaccctcacac
tttgaagatgttgttgccgtgaatgctttatataggccgggccctatggattatatacaa
gactatatcaagaggaaacatggaaatatggaatatggttttccacatcctgacttaaaa
gggatattaggtccgacttttggggtgttgatctatcaagagcagatcatgcaggtagcc
agacgagttgcagggtactcattaggtgaagcggatctattaaggagagctatcagtaaa
aaacaaggggatatatggtcgaacgagcgggataagtttattgccggttgcaaaaagaag
ggttatgaagaatctgttgccaccgaactttttgattggattgtgaaattctcgaactat
ggttttaacaggagccatgcggtggcatacagtttgatttcatattggttagctttcatt
aaagcccactatccttctcattttttagcagagttgatgaatgctaatatcggagaccgg
gataaagggactatatatattcgagaagcccgggagatgaatgtgaaggtgaacgctccc
tcgatcaatcgcagtcatatcttgactcgggatgataaaggagagataagaatggggctc
ttggccatcaaaggactcggctaccaagctgctcaggctatcgttgatggaagggttgat
ggaccatacaaaagcctgaacgacttctgtctaaggctggatgataaagctgtttcaagg
tcagtcatcgaagcattgatcatatccggcgcctttgatgaattgcatcaaaatcgggcg
agttctctggcaagtattgatcaggccctcgagcagggggaattatttaaagaatttcaa
gatcaaccaggctttttcggtacagatattgagatggggatggtagaggtggatccattt
cctcctttgaaggagttatcgatggaaaaagaagtgcttggtgcttatatgtctgaacac
ccattgggacatcaccgcaatgcgttacgcagcagaggaatgatttccctctataaggcc
gatcagttgaaatcaaagaggaagttagtcacagctgttgttctcgaaagtttccgtgag
atcagaacaaaaagaggagactcgatgtcctttgtaaccattagtgatgagactgctgaa
atggaggctgttttgtttcctgaggcatatcgaaatgtgaaaccgtggttgaaggagcaa
atgcttgttattgcagaagggaaaattgaagagaggaacaaccgtaagcaaatgattatc
aatcagcttaagccgtttgaattgagtgaaagagagaataaggcagaaaggcgtctattt
gtgaaggtaacaaaggatacggagcatacagctattgataagctgaaagaggcagcagaa
tatttcccggggaatacacctgtgttgatatttcgatcagaagaccgaaaaatctaccat
ttagatcaggactattcattagaagtcagcagggaatgtctgaatatgttgaatgacttt
ttcggttctcaatcagtggctttacgcacacaggataaacacatggatgtctaa
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integrated database retrieval system
