Halobellus limi: DV707_00220
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Entry
DV707_00220 CDS
T05944
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
hlm
Halobellus limi
Brite
KEGG Orthology (KO) [BR:
hlm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hlm03016
]
DV707_00220 (endA)
Enzymes [BR:
hlm01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
DV707_00220 (endA)
Transfer RNA biogenesis [BR:
hlm03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
DV707_00220 (endA)
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Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
Motif
Other DBs
NCBI-ProteinID:
QCC46232
UniProt:
A0A1H5X7W7
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Position
complement(44830..45942)
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AA seq
370 aa
AA seq
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MDGTLADGVVRVGGDARQRFYDARGYGRPLDRNRIELAPVEAAHLLSRGDLDAVVDESAA
PDGDAPRLGFREFLVTTGATLRFAVYKDLRDRGFYLSPAREDWPGVDDAVAGDTGIDFVV
YPRGKGPWDDEVAYRIRVAGERERISAASLGDVVLAIVDEDGDLTYFETDGDPAIGEEGS
GEDGREPGTLPSRVEADLPSSVEADLLDDRVVCYEAAEELYEDHFYGQRLFGRNAESGPL
QLSLVEGAYLAQRGVVDVDPDAVVALGRDVEGERFDRRLRTYAALRDRGVVPKSGFKFGS
DFRVYEEFTDVDSLSHSTDLVRVGAPNHAFYPRDLSLDVRLAGGVRKRMVFALTAANGEI
DWLSVARVTP
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggacgggacactggccgacggcgtggtccgcgtcggcggcgacgccagacagcggttc
tacgacgcccggggctacggccgcccgctcgaccgcaaccgcatcgaactggcccccgtc
gaggccgcccacctcctctcgcgcggcgacctcgacgccgtcgtcgacgagtcggctgct
cccgacggcgacgcgccccgcctgggcttccgcgagttcctcgtgacaacgggggcgact
ctccggttcgcggtctacaaggacctccgcgaccgcgggttctatctctcgccagcgcgc
gaggactggcccggcgtcgacgacgcggtcgcgggagacaccggaatcgacttcgtcgtc
tacccacgcggcaagggcccttgggacgacgaggtcgcctaccggatccgcgtcgcgggc
gagcgcgagcggatctcggcggcgtcgctcggtgacgtcgtcctcgcgatcgtcgacgag
gacggtgacctgacctacttcgagaccgacggcgatccggcgatcggtgaggagggaagc
ggcgaggatggacgcgaaccaggaaccctcccgtcgagggtcgaggccgatctgccgagt
tcggtcgaggccgacctgctcgacgaccgcgtggtctgctatgaggccgccgaggagctc
tacgaggaccacttctacggccagcggctgttcggtcgcaacgccgagtcggggccgctt
cagctctcgctcgtcgagggcgcgtacctcgcccagcgcggcgtcgtcgacgtcgatccc
gacgccgtcgtggcgctcggccgcgacgtcgagggcgagcggttcgacagacgcctccgg
acctacgcggcgctcagggaccgcggcgtcgttccgaagagcggcttcaagttcggttcg
gacttccgcgtctacgaggagttcaccgacgtcgactcgctgagtcactcgacggacctc
gtgcgcgtgggcgcgccgaatcacgcgttctatccgcgggacctctcgctcgacgtccgc
ctcgccggcggggtccggaagcgaatggtttttgcgctcaccgcggcgaacggcgagata
gactggctctcggtagcccgcgttaccccatga
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