Halobellus limi: DV707_00630
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Entry
DV707_00630 CDS
T05944
Name
(GenBank) recombinase RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hlm
Halobellus limi
Pathway
hlm03410
Base excision repair
hlm03430
Mismatch repair
hlm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hlm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DV707_00630
03430 Mismatch repair
DV707_00630
03440 Homologous recombination
DV707_00630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hlm03400
]
DV707_00630
DNA repair and recombination proteins [BR:
hlm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
DV707_00630
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DV707_00630
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DV707_00630
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH_CID
DHHA1
DHH
DUF6003
Motif
Other DBs
NCBI-ProteinID:
QCC46302
UniProt:
A0A1H5WZN4
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Position
126385..127836
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AA seq
483 aa
AA seq
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MSADTTTSDDGPVPALRERAVACADRLRAADRVLLASHIDADGLTSAAIAAAALERAGIP
FETVFAKQLDEREVARIAATDHETVLFTDFGSGQLDVIAPYAGEGAFTPVIADHHQPADL
PDGVDEPAHHLNPLLFGLDGASELSGAGASYVLARALESPEGDNRDLAGLAVVGAVGDMQ
GTDGGLSGANQGIVEEGVAAGVVEEATDLLVYGRQTRPLPKFLEYATNVRIPGITNDENG
AIEFLSDLDLDLKEGGEWRRWVDLTMDERQALVSGLLQRAIASGVPADRIDALVGTTYTL
TREEPGTELRDVSEFSTLLNATARYERADVGLAVCLGDREGALDRARTLLRNHRRNLSEG
LQWVQNEGTTVEDNVQWFDAGSRIRETIVGIVAGMAVGASGVRGDIPILAFAEKSDEEVK
VSARGSHALVRDGLDLSAVMREASRSVGGDGGGHDVAAGATIPTGTREAFVAEADRLVGE
QLE
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggacacgacgacgagcgacgacggtccggtccccgccctccgggaacgggcc
gtcgcctgcgcggaccgactgcgagcggccgatcgcgtgctgctcgcgtcgcacatcgac
gctgacggcctgacgagcgcggccatcgccgccgcggcgctggagcgcgcgggcatcccg
ttcgagaccgtgttcgcgaagcaactcgacgagcgggaggtcgcccgtatcgccgctacc
gaccacgagacggtgctcttcaccgacttcggcagcggccagttggacgtcatcgcccca
tacgctggcgagggcgcgttcacgccggtgatcgccgatcaccaccagccggccgacctc
ccggacggcgtcgacgaaccggcccaccacctgaacccgctgctgttcggtctcgacggc
gcgtcggaactctcgggtgccggcgcgagctacgtcctcgcgcgggcgctcgaatcacct
gagggcgacaaccgcgacctcgccggtctcgccgtcgtcggcgcggtcggcgatatgcag
ggcaccgacggcggcctctcgggggcgaaccaggggatcgtcgaggagggcgtcgccgcc
ggcgtcgtcgaggaggccacggacctgctcgtctacgggcggcagacccgaccgctcccg
aagttcctcgagtacgccaccaacgtccggattcccgggatcacgaacgacgagaacgga
gccatcgagttcctctcggacctcgatctggacctgaaagaggggggcgagtggcgccgc
tgggtcgatctcacgatggacgagcgacaggcgctcgtgagcggtctgctgcagcgggcc
atcgcctcgggggtcccggccgaccggatcgacgcgctcgtgggcactacctacaccctg
acccgcgaggaacccggtaccgaactccgagacgtcagcgagttctcgacgctcctgaac
gccaccgcgcgctacgagcgcgcggacgtcggactcgccgtctgtctgggcgaccgcgaa
ggcgcgctcgaccgcgcgcggacgctcctgcggaatcaccgccgcaacctctcggagggg
ctgcagtgggtccaaaacgagggaacgaccgtcgaggacaacgtccagtggttcgacgcc
ggatcgcggatccgcgagaccatcgtcggcatcgtcgccgggatggcggtcggggcctcg
ggagtccgcggcgacatccccatcctcgcgttcgccgagaagtccgacgaggaagtgaaa
gtgagcgcccgcggctcccacgcgctcgtccgcgacggcctggacctctccgcggtgatg
cgcgaagcgtcccgctccgtcggcggcgacggcggtggacacgacgtcgccgccggcgcg
acgatcccgaccggaacgcgcgaggcgttcgtcgcggaggcggaccgcctcgtcggcgag
caactcgagtga
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