KEGG   Halobellus limi: DV707_00630
Entry
DV707_00630       CDS       T05944                                 
Name
(GenBank) recombinase RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hlm  Halobellus limi
Pathway
hlm03410  Base excision repair
hlm03430  Mismatch repair
hlm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hlm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    DV707_00630
   03430 Mismatch repair
    DV707_00630
   03440 Homologous recombination
    DV707_00630
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hlm03400]
    DV707_00630
DNA repair and recombination proteins [BR:hlm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     DV707_00630
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     DV707_00630
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      DV707_00630
SSDB
Motif
Pfam: DHH_CID DHHA1 DHH DUF6003
Other DBs
NCBI-ProteinID: QCC46302
UniProt: A0A1H5WZN4
LinkDB
Position
126385..127836
AA seq 483 aa
MSADTTTSDDGPVPALRERAVACADRLRAADRVLLASHIDADGLTSAAIAAAALERAGIP
FETVFAKQLDEREVARIAATDHETVLFTDFGSGQLDVIAPYAGEGAFTPVIADHHQPADL
PDGVDEPAHHLNPLLFGLDGASELSGAGASYVLARALESPEGDNRDLAGLAVVGAVGDMQ
GTDGGLSGANQGIVEEGVAAGVVEEATDLLVYGRQTRPLPKFLEYATNVRIPGITNDENG
AIEFLSDLDLDLKEGGEWRRWVDLTMDERQALVSGLLQRAIASGVPADRIDALVGTTYTL
TREEPGTELRDVSEFSTLLNATARYERADVGLAVCLGDREGALDRARTLLRNHRRNLSEG
LQWVQNEGTTVEDNVQWFDAGSRIRETIVGIVAGMAVGASGVRGDIPILAFAEKSDEEVK
VSARGSHALVRDGLDLSAVMREASRSVGGDGGGHDVAAGATIPTGTREAFVAEADRLVGE
QLE
NT seq 1452 nt   +upstreamnt  +downstreamnt
atgagcgcggacacgacgacgagcgacgacggtccggtccccgccctccgggaacgggcc
gtcgcctgcgcggaccgactgcgagcggccgatcgcgtgctgctcgcgtcgcacatcgac
gctgacggcctgacgagcgcggccatcgccgccgcggcgctggagcgcgcgggcatcccg
ttcgagaccgtgttcgcgaagcaactcgacgagcgggaggtcgcccgtatcgccgctacc
gaccacgagacggtgctcttcaccgacttcggcagcggccagttggacgtcatcgcccca
tacgctggcgagggcgcgttcacgccggtgatcgccgatcaccaccagccggccgacctc
ccggacggcgtcgacgaaccggcccaccacctgaacccgctgctgttcggtctcgacggc
gcgtcggaactctcgggtgccggcgcgagctacgtcctcgcgcgggcgctcgaatcacct
gagggcgacaaccgcgacctcgccggtctcgccgtcgtcggcgcggtcggcgatatgcag
ggcaccgacggcggcctctcgggggcgaaccaggggatcgtcgaggagggcgtcgccgcc
ggcgtcgtcgaggaggccacggacctgctcgtctacgggcggcagacccgaccgctcccg
aagttcctcgagtacgccaccaacgtccggattcccgggatcacgaacgacgagaacgga
gccatcgagttcctctcggacctcgatctggacctgaaagaggggggcgagtggcgccgc
tgggtcgatctcacgatggacgagcgacaggcgctcgtgagcggtctgctgcagcgggcc
atcgcctcgggggtcccggccgaccggatcgacgcgctcgtgggcactacctacaccctg
acccgcgaggaacccggtaccgaactccgagacgtcagcgagttctcgacgctcctgaac
gccaccgcgcgctacgagcgcgcggacgtcggactcgccgtctgtctgggcgaccgcgaa
ggcgcgctcgaccgcgcgcggacgctcctgcggaatcaccgccgcaacctctcggagggg
ctgcagtgggtccaaaacgagggaacgaccgtcgaggacaacgtccagtggttcgacgcc
ggatcgcggatccgcgagaccatcgtcggcatcgtcgccgggatggcggtcggggcctcg
ggagtccgcggcgacatccccatcctcgcgttcgccgagaagtccgacgaggaagtgaaa
gtgagcgcccgcggctcccacgcgctcgtccgcgacggcctggacctctccgcggtgatg
cgcgaagcgtcccgctccgtcggcggcgacggcggtggacacgacgtcgccgccggcgcg
acgatcccgaccggaacgcgcgaggcgttcgtcgcggaggcggaccgcctcgtcggcgag
caactcgagtga

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