Halobellus limi: DV707_03230
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Entry
DV707_03230 CDS
T05944
Name
(GenBank) MiaB/RimO family radical SAM methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
hlm
Halobellus limi
Brite
KEGG Orthology (KO) [BR:
hlm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hlm03016
]
DV707_03230
Enzymes [BR:
hlm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
DV707_03230
Transfer RNA biogenesis [BR:
hlm03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
DV707_03230
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Motif
Other DBs
NCBI-ProteinID:
QCC46760
UniProt:
A0A1H5VBG9
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Position
626518..627771
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AA seq
417 aa
AA seq
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MARYHIETYGCTSNRGESRQIESALRDAGHYPVDGPEAADVAIMNTCTVVEKTERNMLRR
AKELESETADLIITGCMALAQGEEFREEGVDAQILHWDDVPTAVTNGECPNPGPGTEPVL
DGVVGILPIARGCLSNCSYCITKFATGRVDSPPVEENVEKARALVHAGAKELRITGQDTG
VYGWDTGDRKLPELLDRICTEIDGDFRVRLGMANPGGIHGIREELVEVFARHDELYNFIH
LPVQSGSDTVLEDMRRQHRVEKFLEIVETFDSTLEYWTLSTDFIVGFPTETEEDHAQSMA
LFREVRPEKVNVTRFSKRPGTDAAEMKGLGGTVKKERSKAMSELKREVVAEAYESMIGET
RRVMAVREGTGDSMKCRDEAYRQIIVRDADERGIEPGDFLDVEVTSHQTVYAFGEPV
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggcccgataccacatcgagacgtacggctgcacctccaaccgcggcgagagccggcag
atcgagagcgcgctccgcgacgccggccactaccccgtcgacggtccggaggcggccgac
gtcgccattatgaacacctgcacggtggtcgagaagacggagcgcaacatgctccgtcgg
gccaaagagctggagtcggagacggcggatctcatcatcacgggctgtatggcgctcgca
cagggcgaggagttccgcgaggagggcgtcgacgcgcagatcctccactgggacgacgtc
cccacggcggtcacgaacggcgagtgtccgaaccccgggccgggaaccgaacccgtcctc
gacggcgtcgtcggcatcctcccgatcgcccggggctgtctgtcgaactgctcgtactgt
atcacgaagttcgcgaccggccgcgtcgactccccgcccgtcgaggagaacgtcgagaag
gcccgcgccttagtccacgccggcgcgaaggagctccggatcacgggccaggacaccggc
gtctacggctgggatacgggcgacaggaagctccccgaactgctcgatcggatctgtacc
gagatcgacggcgacttccgggtccggctggggatggccaaccccggcggcatccacgga
atccgcgaggaactcgtcgaggtcttcgcgcggcacgacgagctgtacaacttcatccac
ctcccggtgcagtcggggtcggacacggtgctcgaagatatgcggcgacagcatcgcgtc
gagaagttcctcgaaatcgtcgagacgttcgactcgacgctggagtactggacgctctcg
acggacttcatcgtcggcttcccgaccgagaccgaggaagaccacgcccagagtatggcg
ctgttccgggaggtcagacccgagaaggtgaacgtcacccgcttctcgaagcgccccggc
accgacgccgccgagatgaagggcctcggcgggacggtgaagaaggagcgctcgaaggcg
atgtccgaactgaagcgggaggtcgtcgccgaggcctacgagtcgatgatcggcgagacc
cgtcgggtgatggccgtccgcgaggggaccggcgactcgatgaagtgccgcgacgaggcg
taccgacagatcatcgtccgggatgcggacgaacgagggatcgaaccgggcgacttcctc
gacgtcgaggtgacgagtcaccagacggtctacgcgttcggcgaaccggtctga
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