Halobellus limi: DV707_06105
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Entry
DV707_06105 CDS
T05944
Name
(GenBank) RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hlm
Halobellus limi
Brite
KEGG Orthology (KO) [BR:
hlm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hlm03016
]
DV707_06105
Enzymes [BR:
hlm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DV707_06105
Transfer RNA biogenesis [BR:
hlm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DV707_06105
Prokaryotic type
DV707_06105
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
PUA
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
QCC47275
UniProt:
A0A1H5TPP8
LinkDB
All DBs
Position
complement(1207927..1208811)
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AA seq
294 aa
AA seq
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MPTLRDPPEERSVDDLLSFGVVNLDKPPGPSAHQVSAWARDRAGVGRAAHAGTLDPKVTG
CLPILLGDATRLAQVFLEGTKEYVAVLELHGPAPADLDAVLAEFEGEIYQKPPRKSAVAR
RLRTREIHELDLLEVRERQALIRIRCESGTYVRKLCHDLGLAAGTGAHMGDLRRTATDPF
DDTALVSTADLTDGLVFADEGDEGPLREVVAPAERALRHLPRLTVAFSAAEQIAEGAPVY
APGVVDVGDAVETAEKETLLACFTPDGAAVCLGRLVGDPTASTGEVVSLERVLV
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
gtgccgacgctccgcgacccgcccgaggaacggtcggtcgacgacctgctgtcgttcggc
gtcgtcaacctcgacaagccgccggggccctcggcccaccaggtgtcggcgtgggcccgc
gaccgagcgggcgtcggccgcgccgcccacgcggggacgctcgatccgaaggtgaccggc
tgtctgccgatcctgctcggcgacgcgacccggctcgcgcaggtgttcctcgaaggcacg
aaggagtacgtcgcggtcctggaactgcacggccccgcgcccgcagacctcgacgccgta
ctcgcggagttcgaaggcgagatctaccagaaaccgccccggaagagcgccgtcgcgcgc
cgcctccgaacccgcgagatccacgaactcgatctcctggaggttcgcgagcggcaggcc
ctgattcgcatccgctgtgagagcgggacgtacgtccgaaagctctgtcacgacctcgga
ctcgcggcggggaccggcgcgcatatgggcgatctccgccggaccgcgacggacccgttc
gacgacacggctctggtctcgaccgcggacctgacggacgggctcgtcttcgccgatgag
ggcgacgaggggccgctccgcgaggtggtcgcgcccgccgagcgagcacttcggcacctc
ccgcgactcaccgtcgcgttctccgcggccgaacagatcgccgagggcgcgccggtgtac
gcgcccggggtcgtcgacgtcggggacgccgtcgagacggcagagaaggagacgctcctc
gcctgcttcacccccgacggtgccgccgtctgtctcggccggttggtgggcgatccgacg
gcgtcgaccggcgaagtggtctcgctcgaacgcgtcctcgtctga
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