KEGG   Halobellus limi: DV707_06635
Entry
DV707_06635       CDS       T05944                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
hlm  Halobellus limi
Pathway
hlm03030  DNA replication
hlm03410  Base excision repair
hlm03420  Nucleotide excision repair
hlm03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hlm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DV707_06635
   03410 Base excision repair
    DV707_06635
   03420 Nucleotide excision repair
    DV707_06635
   03430 Mismatch repair
    DV707_06635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hlm03032]
    DV707_06635
   03400 DNA repair and recombination proteins [BR:hlm03400]
    DV707_06635
Enzymes [BR:hlm01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     DV707_06635
    6.5.1.6  DNA ligase (ATP or NAD+)
     DV707_06635
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     DV707_06635
DNA replication proteins [BR:hlm03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    DV707_06635
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     DV707_06635
DNA repair and recombination proteins [BR:hlm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DV707_06635
   NER (nucleotide excision repair)
    Other NER factors
     DV707_06635
   MMR (mismatch excision repair)
    Other MMR factors
     DV707_06635
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase Phage_TAC_15
Other DBs
NCBI-ProteinID: QCC48886
UniProt: A0A1H5TCA4
LinkDB
Position
complement(1309215..1311029)
AA seq 604 aa
MEFAEFAARAEEIAEEPGDLATTERVRDLLADASEDLPVVVRFLQGRVYPAWDATTLDIG
PALLHEAIARAAGPNVDSDDVESKLAEVGEIGAVAATYEFGGQRGLGAFGGGAADGSGER
GGGLTVAAVDDRLREIATTTGEGSEGRRLDALFGLFNRASQTEAKFLARLVLGEMRIGVG
GGTVRDATAAAFVDEGVAGERGETPSEAPGGDESEATPDSDAVDAVERALQVSNDYGMVA
RVAREEGREGLDAVGLEVGRPVQAMLAQAGSATEAIEEWGEAVVETKFDGARVQVHFDGE
ETALFSRNMDDVTDPLPEVVEFVERAVDVPVVLDGEVVAVDDYGSPLPFQEVLRRFRRKY
DVERMREEVRVELRAFDCLHVDGDDLLDAPLSERHDRLRALLGDTDAVSEPVVSDDPDEI
AAVEERALEAGHEGIMLKEPESTYAPGKRGRNWLKRKPDVETLDLVVTGAEWGEGRRANL
FGTFLLSARVDGEAAGRDATATDGDAAADSDAYATIGKVATGITDEELEALTERLEPHIE
REDGQTVSIAPEVVFEVGYEEIQASPTYESGYALRFPRYVTVREDKSPVDADGLARVERL
VDEQ
NT seq 1815 nt   +upstreamnt  +downstreamnt
atggagttcgccgagttcgctgcgcgcgccgaagagatcgccgaggagcccggcgacctg
gcgacgaccgagcgggtccgcgacctgctcgcggacgcctcggaggacctcccggtcgtc
gtccgattcctccagggtcgggtgtacccggcgtgggacgcgacgacgctcgatatcggc
cccgcactcctccacgaggccatcgcccgcgccgcgggcccgaacgtcgacagcgacgac
gtcgagtcgaaactggccgaggtcggcgagatcggcgccgtcgcggcgacctacgagttc
ggcgggcagcgcggcctcggcgcgttcggcggcggcgcggccgacggctccggagagcgc
ggtggcggactcaccgtcgcggcggtcgacgaccggcttcgcgagatcgcgacgacgacg
ggcgagggcagcgaggggcgacggctcgacgccctcttcggcctgttcaaccgggcgtcg
cagacggaggcgaagttcctcgcccgactcgtcctcggggagatgcggatcggggtcggc
ggggggaccgtcagagacgcgaccgccgcggcgttcgtcgacgagggcgtcgccggcgag
aggggcgagacgccctcggaggctcccgggggcgacgaatccgaagcgacgccggactcg
gacgccgtcgacgccgtcgagcgcgcgctccaggtctcgaacgactacgggatggtggct
cgcgtcgcccgcgaggagggcagggagggcctcgacgcggtcggcctcgaagtcggccgg
ccggtgcaggcgatgctcgcacaggccggcagcgccaccgaggcgatcgaggagtggggc
gaggcggtcgtcgagacgaagttcgacggcgcgcgcgtgcaggtccacttcgacggcgag
gagaccgcgctgttctcgcgaaacatggacgacgtcaccgacccgctcccggaagtcgtc
gagttcgtcgagcgggcggtcgacgtgccggtcgtcttggacggcgaggtcgtcgccgtc
gacgactacgggtcgccgctgccgttccaggaggtgctccgccggttccgccggaagtac
gacgtcgagcggatgcgcgaggaggtccgcgtcgaactccgcgcgttcgactgcctccac
gtcgacggcgacgacctgctcgacgccccgctgagcgagcgtcacgaccggctccgagcg
ctgctcggcgacaccgacgcggtctccgagccagtcgtctcagacgacccggacgagatc
gcggccgtcgaagagcgggcgctggaggccggtcacgaggggatcatgctgaaagagccc
gagtcgacgtacgccccgggcaagcgcggtcgaaactggctgaagcgcaagccggacgtc
gagacgctcgacctcgtcgtcaccggggcggagtggggagagggccgtcgtgcgaacctc
ttcgggacgttcctgctctcggcgcgcgtcgacggcgaagccgccggccgcgatgcgacc
gcgaccgacggcgatgcggccgccgacagcgacgcctacgccaccatcggcaaggtcgcc
acgggcatcaccgacgaggaactcgaagccctgaccgaacggctcgaaccgcacatcgaa
cgcgaggacggacagaccgtctcgatcgccccggaggtcgtcttcgaggtcggctacgag
gagatccaggcgtcgccgacgtacgagtccggctacgcgctccggttccccaggtacgtg
accgtccgcgaggacaagtcgccggtcgacgccgacggcctcgcgcgggtcgaacggctg
gtcgacgagcagtag

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