Entry |
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Name |
(GenBank) DEAD/DEAH box helicase
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KO |
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Organism |
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:hlm00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DV707_07660
09124 Replication and repair
03420 Nucleotide excision repair
DV707_07660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:hlm03021]
DV707_07660
03400 DNA repair and recombination proteins [BR:hlm03400]
DV707_07660
Enzymes [BR:hlm01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DV707_07660
Transcription machinery [BR:hlm03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
DV707_07660
DNA repair and recombination proteins [BR:hlm03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
DV707_07660
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
complement(1515461..1517566)
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AA seq |
701 aa
MTDEEGSAESDTDDRSEPDETSGRAAEAVAAESPGLETADGEAVDVESFRDVLEAEGRPV
VTASEVARRLDTTQSAAAETLEDLSESGSVERVNVESDPIVYFPTEWSELADRERIVLFP
ERREIVVDRPTQYTRAQLSQFAHLVDSTGKRQRTTADREANTRGYIYEIRQEDVWQAPFD
DVSDLLSLMRSVLPRRSPHLESWVESQWKRANRFRLFTHEDGYVVLEGASESLMGNVGRQ
KLGEEQLVAPISDTQSWVRDGAEAEIKRTLYEAGYPVVDDRDLDTGDPLDLELTVDLREY
QEDWIERFLDQRSGVLVGPSGAGKTVTAIGVLAAVGGETLVLVPSRELATQWREELLRHT
TLDPDQIGEYHGGQKEIRPVTIATYQTAGMDRHRSLFGSRGWGLVVYDEVHHIPSKIYRR
SADLQTKHRLGLSATPVREDDKEKEIFTLIGPPIGTDWSKLFDAGYVQEPEVQIRYLPWA
DDLARNEWASAEGRDRHRIAAENPQKIEAARRLLDAHPDSKALVFVDWLDQGEAIAEALD
VPFVSGEMPHHRRERVFDSFRDGDLDTLVISRVGDEGIDLPNAEVAIVASGLGGSRRQGA
QRAGRTMRPAGGSRVYVLATRGTSEEDFAQRRMRHLAEKGVRVTESDRTQTGDGEDRDDD
PDAENRDGARETENRDGDPDAENRDGDPDAENRDGDPETGG |
NT seq |
2106 nt +upstreamnt +downstreamnt
atgaccgacgaggaggggagcgccgaatcagataccgacgaccggtccgaaccggacgag
acgtccggccgcgcggccgaggctgtcgccgccgagagccccggcctcgagacagccgac
ggcgaggcggtcgacgtcgagagcttccgcgacgtactggaggcggagggtcggcccgtg
gtgacggcgtcggaagtggcccggagactcgacaccacgcagtcggccgctgcggagaca
ctcgaggacctctcggagtcgggctccgtagagcgcgttaacgtcgaatcggacccgatc
gtctactttccgacggagtggagcgaactcgccgaccgggagcggatcgtgctgttcccc
gagcgtcgggagatcgtcgtcgaccgtcccacacagtacacccgcgcgcagctctcgcag
ttcgcccacctggtcgattccaccgggaagcgacagcgaactaccgcggatcgggaggcg
aacacgcgcggatacatctacgagatcagacaggaggacgtctggcaggccccgttcgac
gacgtgtccgacctgctctcgctgatgcgctcggtactcccgcggcgatcaccgcacctc
gaatcgtgggtggagtcgcagtggaaacgagcgaaccgattcaggctgttcacccacgag
gacggctacgtcgtcctcgaaggcgcctcggagagcctgatggggaacgtgggccgccag
aaactcggtgaggagcagttggtggccccgatatcggacactcagagctgggtccgcgac
ggcgcggaagcggagatcaagcggaccctctacgaggcgggctatccggtcgtcgacgac
cgcgatctcgacaccggggacccgctcgacctcgaactgacggtcgacctccgcgagtat
caggaagactggatcgaacggttcctcgaccagcgctcgggcgtcctcgtcggcccctcg
ggcgcgggcaagaccgtgacggccatcggcgtactggcggccgtcggcggcgagacgctc
gtgttggtcccctctagggaactcgccacccagtggcgcgaggaactcctccggcacacg
acgctcgacccggatcagatcggcgagtatcacggcgggcagaaggagatccggccggtg
acgatcgcgacgtaccagaccgccgggatggaccgccaccgctccctgttcggctcccgc
ggatgggggctcgtcgtctacgacgaggtccaccacatcccctcgaaaatctaccgacgg
agcgcggacctccagacgaagcaccgcctcggactctcggcgacgcccgtgcgggaggac
gacaaggagaaggagatattcacgctgatcgggccgccgatcggcaccgactggtcgaag
ctcttcgacgccgggtacgtccaggaaccggaggttcagatcaggtatctgccgtgggcc
gacgacctcgcacgcaacgagtgggcgagcgcggaggggcgagacagacaccggatcgcg
gcggagaacccacagaagatcgaagcggcccgccggttgctcgacgcacaccccgactcg
aaagcgctcgtcttcgtcgactggctcgaccagggcgaggcgatcgcggaggcgctcgac
gtaccgttcgtcagcggcgagatgccgcaccatcgccgcgaacgcgtgttcgactcgttc
cgcgacggcgacctcgacacgctcgtgatatcccgcgtcggcgacgaggggatcgacctc
ccgaacgccgaagtcgcgatcgtcgcgtccggactcgggggatcgcgccgacagggcgca
cagcgcgccggacggacgatgcgcccggccggcgggtcccgggtgtacgtgctcgccact
cgcggcacctccgaggaagatttcgcacagcggcggatgcgtcacctcgcggaaaaaggc
gttcgggtgacggaatccgaccgcactcagacgggagatggcgaggaccgagatgacgat
ccggacgcggaaaaccgagacggcgcccgagagacggagaaccgggatggcgacccagac
gcggagaaccgagacggcgacccagacgcggaaaaccgagacggcgacccagagaccgga
ggctga |