KEGG   Halobellus limi: DV707_08375
Entry
DV707_08375       CDS       T05944                                 
Name
(GenBank) SMC family ATPase
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
hlm  Halobellus limi
Brite
KEGG Orthology (KO) [BR:hlm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hlm03400]
    DV707_08375
DNA repair and recombination proteins [BR:hlm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     DV707_08375
    Archaeal homologous recombinant proteins
     DV707_08375
SSDB
Motif
Pfam: SMC_N SbcC_Walker_B AAA_29 AAA_15 AAA_13 Prefoldin_2 Med9 AAA_21 GAS Myosin_tail_1 Fib_alpha DUF5082 ABC_tran HIP1_clath_bdg PRKG1_interact Rad50_zn_hook EXOC6_Sec15_N DUF1192 NPV_P10 FliJ Fez1 DUF1664 KxDL MukB Baculo_PEP_C BLOC1_2
Other DBs
NCBI-ProteinID: QCC47672
UniProt: A0A1H6APU3
LinkDB
Position
complement(1686264..1688978)
AA seq 904 aa
MRIKEVTLENVKSYEEKTRIDLQGGVTAILGENGSGKSTIQEAIGFALFDSLPFNNNEFV
REGASSGTVEVVIEFDQGDDVEVYRVTRSAGRSNYGVARYDEPNDEWVSQDIDSKSGLID
WLCARFDLDSKDDLQSLWKSCVGVPQTRFLADFAQTPRNRKSTFDELLGVDAYEESFKGA
LKQVPDTIEAEQEDVRGEIQQLTGEVQDLPAKRSKKTELENQIQSISTEIEETKAELSEV
KEKFDELDSVKNRIEELDTEIAQLEQEISAKKDALETAKSELTKAREAAQKCEEAAEGHE
KYEEAKEREEELSEQKKELDALEDQLSEQEARLQRLKDKKETLQEQTEKHREAKESLEQH
EQEKERYEKLGEKISDLESDEKTIDRLEGEIDDLDDEAHEALLELQEKEELIAEIEAEAK
DAPDAGELRDEIGDKRAERKSLATEKKDIEEHLSILRDADSDAPCPTCGKSLDPEDREER
IEEQEARLGEIESDRARLKEKIDQLQEDLAEAEQVEDRVSKLDIHRESVTQLENELADIR
SERKEKEEKITQLEEEVETLPSLREEHTSLEDAKDAYYQAQARVEEYSDAPEELEEAKRK
IEETAEEIEQTEEELTEYAGVEDELEQVRTTLGKHEADYKKYERNKQAAEQLEEREQAVK
TLEDEIEGLEGEKGELEDNLSERQQEFDAEEHQRLEKRADALDDEITKLGVQRSERKEQL
EEVNAEVERLEGKLEERSEKVETLRDLTADHNFATWVRKNVRKAGPKMREVITSRIGTRA
NSIFRSIRGRNTEQLEWTSDYDIVVVDADVRKSFSTLSGGEKMAAALAVRLAILEQMSGL
GIAFLDEPTANLDQQKKANLVEQLNGLDAFEQLTVISHDSTFETMTDHSIIVEKPEQTSE
VVSD
NT seq 2715 nt   +upstreamnt  +downstreamnt
atgaggatcaaggaagtcactctggagaacgtcaagtcctacgaagagaagacaagaatc
gacctacaggggggtgtcacggccatcctcggtgagaacggttccgggaagtcgacgata
caggaagcaatcggtttcgctctcttcgactcactaccgttcaacaacaacgagttcgtt
cgtgagggggcgtcctctgggacagtcgaggtcgtcatcgaattcgatcagggagacgac
gtggaggtgtacagagtgactcgttctgccggtcgatcgaactacggcgtcgcccgctat
gacgagccgaacgacgagtgggtgagtcaggatatcgactcgaagagcggcttgatcgat
tggctctgtgctcggttcgatctggacagcaaggacgacttacagagtctctggaagtcg
tgtgtcggagtcccccagacccgattcctcgccgacttcgcacagacaccacgcaatcgg
aagtccaccttcgacgaactactcggcgtcgatgcatacgaggagtcgttcaaaggcgct
ctgaagcaagttccagatacaattgaggcagagcaagaagatgtacgaggcgagattcag
caactgacgggagaggtacaggatctcccggctaaacgctcgaagaaaacggagctggaa
aatcagattcagtctatctctacggagatcgaggagacgaaagccgaactcagcgaggtc
aaagaaaagttcgacgaactggacagcgtcaagaaccggatcgaggagttggatacggag
attgcccaactggaacaggagatcagcgcgaagaaggacgctctggagaccgcaaagtcg
gaactcacgaaggcacgtgaagccgcccagaaatgcgaggaggcggcggaagggcacgag
aaatacgaggaagcaaaggagcgggaagaggagctcagcgagcagaagaaagagctcgac
gcgctcgaagatcaactctctgagcaggaagccagactccagcgtctgaaggataagaag
gagacgctacaggagcagaccgagaaacatcgagaggccaaggagagcctcgaacagcac
gaacaagagaaggaacgttacgagaagttaggagagaagatatctgacctcgaaagcgat
gagaagacgatcgaccgactggagggcgagatagatgacctcgacgatgaggcacacgag
gcactattggaacttcaagagaaagaagaactcatcgcggagatcgaggcagaggcaaag
gatgccccggatgccggcgaactccgggacgagataggggataagcgagcggagcgcaag
tcgcttgcaacagagaagaaggacatcgaagaacatctctcgattcttcgagacgccgac
tccgatgccccctgtccaacgtgtgggaaatcgttggatccggaggatcgtgaggagaga
attgaggagcaggaggcccgtctgggggagattgaatcggaccgcgcccggctgaaagag
aaaatcgaccagctccaagaggacctcgcagaagctgagcaagttgaggatcgcgtatcg
aagttagacatccaccgtgaatcggttactcaactagaaaacgagctggccgacatccgg
agtgagcgaaaggagaaggaggagaagatcacccagctcgaagaggaagttgagaccctg
ccgtcacttcgggaggaacacacctcgcttgaggatgcgaaagatgcgtactaccaagca
caggcccgtgtagaggaatactccgacgctcctgaggagttagaggaagccaagaggaag
atcgaagagactgctgaggagatcgagcagactgaggaagaactgaccgagtacgccggt
gtcgaagacgagctagagcaagtcaggaccacactcggaaagcacgaggcggactacaag
aagtacgagcggaacaagcaagcggcagaacagctcgaagagcgagaacaagccgtcaaa
actctggaagacgaaatcgaggggctggagggcgagaagggagagctggaagacaatctc
tccgagcggcagcaagagttcgacgctgaggaacaccagcggcttgaaaagcgggctgac
gcgctcgacgacgagataacgaaactgggcgtccagaggagcgaacggaaagaacagctt
gaggaggtcaacgctgaagtcgagcgtctggaaggtaaactggaggaacgatctgagaag
gtcgaaacactgcgagacctcactgccgaccataatttcgccacgtgggttcggaagaac
gtccgaaaggctggtccgaagatgcgggaagtaatcaccagcaggatcggcacacgtgcg
aactcgatcttccggtcgattcggggacgaaatacagagcaactggaatggacatcggac
tacgacatcgtcgtcgtcgatgctgatgtccggaaatcgttctcgacactgtcgggcggt
gagaagatggcagcagcgcttgcagtgcggctggcaatcctcgaacagatgtcgggactg
ggaatcgcgttcctcgacgaaccgacggcgaatctggaccagcagaagaaggccaacctc
gtggagcagctaaacggactcgatgccttcgaacagctcaccgtcatcagccacgactca
accttcgaaacaatgaccgaccacagcatcattgtcgagaagccagagcagacttcggag
gtggtgagtgactga

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