Halobellus limi: DV707_11425
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Entry
DV707_11425 CDS
T05944
Name
(GenBank) transcription initiation factor IIB 2
KO
K03124
transcription initiation factor TFIIB
Organism
hlm
Halobellus limi
Pathway
hlm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hlm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DV707_11425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hlm03021
]
DV707_11425
Transcription machinery [BR:
hlm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
DV707_11425
Prokaryotic type
Archaeal type
TFB
DV707_11425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
A2L_zn_ribbon
Zn_ribbon_LysW
Anti-TRAP
HTH_Tnp_ISL3
Lar_restr_allev
Eapp_C
Zn_ribbon_3
DUF7560
Zn_ribbon_RRN7
Zn_ribbon_PaaD
Motif
Other DBs
NCBI-ProteinID:
QCC48225
UniProt:
A0A1H5Z6N1
LinkDB
All DBs
Position
complement(2317020..2318069)
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AA seq
349 aa
AA seq
DB search
MSEKSTYTRVNASTRDESRTNEGRDGDSAGQRWVRPGEEEEETESEQADEELSCPECGGN
VVVDDEHGETVCDDCGLVITEDSVDRGPEWRAFDAKEKDQKSRVGAPTTNTMHDKGLSTN
IDWRDRDAYGNSLSSNQRQKMQRLRKWNERFRTRDSKERNLKQALGEIDRMASALGLPEN
VRETASVIYRRALDEDLLPGRSIEGVATSCVYAAARMAGVPRSLDEISEVSRVPKSEVAR
TYRYIARELSLEVKPADPEQYVPRFASELGLSDEAKLRARQLLKNAKEKGVHSGKSPVGL
AAAAVYAAALLTNEKTTQAAVSDVADISEVTIRNRYHELLEAEESIGLA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagaagagtacttacactcgcgtgaacgcgagcacgagagacgagtcgcgaacg
aacgagggccgagacggcgactcggccggccagcggtgggttcgacccggagaggaagaa
gaggagaccgaatccgaacaggccgacgaggagctgtcctgtccggagtgcggcggcaac
gtcgtcgtcgacgacgaacacggcgagaccgtctgtgacgactgcgggctggtcatcacg
gaggactccgtcgaccgcggtcccgagtggcgcgcgttcgacgccaaggagaaggaccag
aagtcccgcgtgggcgcgccgacgacgaacacgatgcacgacaaggggctgtcgaccaac
atcgactggcgcgaccgcgacgcctacggcaactcgctgtcgtcgaaccagcgccagaag
atgcagcggctccgcaagtggaacgagcgcttccgcacgcgagattcgaaggagcgcaac
ctcaagcaggcgctcggcgagatcgaccggatggcctcggcgctgggcctccccgagaac
gtccgcgagacggcctcggtcatctaccgccgcgcgctcgacgaggacctgctgcccgga
cgctcgatcgagggcgtcgccacctcctgcgtctacgccgccgcgcggatggccggcgtc
ccccggtcgctcgacgagatctcggaggtctcccgcgtccccaagagcgaggtcgcgcgc
acctaccgatacatcgcccgcgagctgtcgctggaggtcaagcccgccgaccccgagcag
tacgtgccgcgcttcgcgtccgaactcggcctctccgacgaggcgaaactccgcgcgcgc
cagctgctgaagaacgccaaggagaagggcgtccactccgggaagtcgccggtcggcctc
gccgccgccgccgtctacgccgcggcgcttctcaccaacgagaagacgacgcaggccgcc
gtcagcgacgtcgccgacatctccgaggtcacgatccgcaaccgctaccacgagctgctg
gaagccgaagagagcatcggcctcgcgtag
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