Haloferax volcanii SVX82: SVXHx_0161
Help
Entry
SVXHx_0161 CDS
T08885
Symbol
spt15
Name
(GenBank) TATA-box binding protein (TBP), component of TFIID and TFIIIB
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
hln
Haloferax volcanii SVX82
Pathway
hln03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hln00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SVXHx_0161 (spt15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hln03000
]
SVXHx_0161 (spt15)
03021 Transcription machinery [BR:
hln03021
]
SVXHx_0161 (spt15)
Transcription factors [BR:
hln03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
SVXHx_0161 (spt15)
Transcription machinery [BR:
hln03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
SVXHx_0161 (spt15)
RNA polymerase III system
TFIIIB
SVXHx_0161 (spt15)
RNA polymerase I system
SL1/TIF-1B
SVXHx_0161 (spt15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
T4bSS_IcmS
DUF218
Motif
Other DBs
NCBI-ProteinID:
WEL24495
LinkDB
All DBs
Position
147641..148210
Genome browser
AA seq
189 aa
AA seq
DB search
MTDPKDTINIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQEPKSAALIFR
SGKIVCTGAKSTDDVHESLEIVFDKLRELQIPVDDDPEITVQNIVTSADLGENLNLNAIA
IGLGLENIEYEPEQFPGLVYRLDEPSVVALLFGSGKLVITGGKQPTDAEAAVDVIISRLS
ELGLLNGSF
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccccaaggacacaatcaacatcgaaaacgtcgtcgcctccacgggaatcggc
caagagctcgacctccagagcgtggcgatggacctcgagggtgccgactacgaccccgag
cagtttccgggactcgtctaccgcacgcaggagccgaagtccgcggcgctcatcttccgg
tccgggaaaatcgtctgcaccggcgcgaagtcgaccgacgacgtccacgagagcctcgaa
atcgtcttcgacaagctccgcgagcttcagattccggtcgacgacgaccccgaaatcacc
gtgcagaacatcgtcacgagcgcggacctcggcgagaacctgaacctcaacgccatcgcc
atcgggctcggtctcgaaaacatcgagtacgaaccggagcagttccccggcctcgtctat
cgcctcgacgaaccgagcgtcgtcgcgctcctcttcgggtcgggcaaactcgtcatcacg
ggcggcaaacagccgacagacgccgaggcggcggtcgacgtcatcatctcgcggctctcc
gaactcggtctcctcaacgggtcgttctaa
DBGET
integrated database retrieval system
