KEGG   Haloferax volcanii SVX82: SVXHx_0258
Entry
SVXHx_0258        CDS       T08885                                 
Symbol
cas6
Name
(GenBank) CRISPR-associated protein Cas6
  KO
K19091  CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
Organism
hln  Haloferax volcanii SVX82
Brite
KEGG Orthology (KO) [BR:hln00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hln02048]
    SVXHx_0258 (cas6)
Prokaryotic defense system [BR:hln02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-A factors
    SVXHx_0258 (cas6)
   Subtype I-D factors
    SVXHx_0258 (cas6)
SSDB
Motif
Pfam: Cas_Cas6_C
Other DBs
NCBI-ProteinID: WEL24592
LinkDB
Position
complement(240382..241155)
AA seq 257 aa
MRLLLRLRARSDAAYDKAYHHKLRGRIWGALEDSKYDKYHDANRPVGFTYSNPFPPGDMR
ENDERTLLIAAPQEDLLAEVAQDLIADRELNIGEMPFHIDELTSLSPDVGEPGSEGMIES
GTGMLVRIPPWRAEEYGIDHEGDEATFWRPKHTMEPLKTQLENNLDQKHDLFCPEYLPGP
SETDYDLFTDYELIKTFAIPVTVSQNQEMTYVLSKWRLGYTVRDDDHRRHLNLALDTGLA
ERNALGFGFINIRDHDG
NT seq 774 nt   +upstreamnt  +downstreamnt
gtgcgactactactccggctgcgagcccgtagtgacgcagcctacgacaaagcgtatcac
cacaaacttcgaggccgaatctggggcgctctggaggactcgaagtacgacaagtaccac
gacgcaaaccgcccggtggggttcacttacagcaacccattccctccgggggacatgcgg
gagaatgacgagcgaaccctcctgatcgcagcaccacaggaggatctcctcgccgaagtc
gcacaggatctgatcgccgatcgagaactaaacatcggtgaaatgccgttccacatcgac
gagctgaccagcctttcacctgacgttggtgagcctggttcggaggggatgatcgagtcg
ggaaccgggatgctcgtccgcattccaccgtggcgagcagaagagtacggcatcgaccac
gagggtgacgaggcgacgttttggcggccgaaacacacgatggagccgctgaagacccaa
ctcgagaacaatctagaccagaaacacgatctgttctgtccagaatacctcccgggcccc
tccgagacggactacgatctgttcaccgactatgagctgatcaagaccttcgcaatcccg
gttacggtctcacagaatcaagagatgacctacgtgctgagcaagtggcggctcggctac
acggtgcgagacgacgaccaccgtcggcacctgaaccttgccctcgatacgggtcttgcc
gagcgcaatgcactgggattcggattcatcaatatcagggaccatgacggataa

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