Haloferax volcanii SVX82: SVXHx_0299
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Entry
SVXHx_0299 CDS
T08885
Symbol
atos2
Name
(GenBank) Signal transduction regulator, contains PAS and HTH domains
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
hln
Haloferax volcanii SVX82
Brite
KEGG Orthology (KO) [BR:
hln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hln03000
]
SVXHx_0299 (atos2)
Transcription factors [BR:
hln03000
]
Prokaryotic type
Helix-turn-helix
Other families
SVXHx_0299 (atos2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAT
PAS_9
HTH_10
PAS
PAS_4
GAF_2
PAS_3
PAS_8
GAF_3
Sigma70_r4
HTH_11
GAF
Sigma70_r4_2
DUF134
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
WEL24631
LinkDB
All DBs
Position
278013..279989
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AA seq
658 aa
AA seq
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MDATSSPTRVLAVVGPAVDRERLVDVLSPLSVSVAPSVDAAGRRAEAESVDCVVLGTDRL
AHVNAVHGALAVPLVVVVPPDGDLSAATARDAGAADVVPVVHSNLFERLPERVESAVAWR
RRGAAAASKITEDLKEQAIDEAPVGITVADCSLPDRPLVYVNEAFETMTGYSADAALGRN
CRYLQGPNTDPERVAALRRAIEAEESASVELLNYRANGETFWNRVDVAPLSGPDGEVTHY
VGFQTDITERVRAEAAAERYAARVDEERARLQTLVEHIEGLLADVTSALVRAESRQELEA
AVCDRVTAAGSFDCAWVGHCDLSPAVIVPNERAGTDTEFLDGLEISRSNPDDPTARAAET
RAVQSAAVGDGSVHAETLVPFDSVIAVPLVHSGTLYGVLTVYTDVAELDDQVRVVFGTLG
RAVGAAIDAFESRRSLLSDERLELELDVRDESQPLVRLAVAGDCELSYRGSAQHDDGTVS
LFVSTHPATEFEEADTDLDGLRSVDVLPRGDDAELYELTFDDGSLLHLVADAGGRLVDLE
VDRLGCRLTVIISDRVAGRALLDDLQTVAANAELRSVTNRSEPPEARREFVASVTDDFTD
RQQSALQLAYLGGYFEWPHAVTGEELAETMGVSRATFHQHLHAAERKLISRFFDSDPY
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggacgccacctcgtctcccacccgcgtcctcgcggtcgtcggtcccgccgtcgaccgg
gagcgactcgtggacgtgctctcgccgctttcggtgtcggtcgccccctcggtcgacgcg
gccggccggcgcgccgaggccgaatcggtcgactgcgtcgtgctcggaaccgaccgcctc
gcccacgtgaacgcggtccacggtgcgctcgcggtcccgctggtcgtcgtcgtcccgccc
gacggcgacctctcggcggcgaccgcccgcgacgcgggcgcggccgacgtggtcccggtc
gtccactcgaacctcttcgaacggcttccagaacgggttgaaagcgccgtcgcgtggcgt
cgccgcggcgcggcggccgcgagcaagattacggaggacctgaaagaacaggcgatagac
gaggctccggtcggcatcaccgtcgcggactgctcgctgcccgaccgaccgctcgtctac
gtcaacgaggcgttcgagacgatgaccggctactcggccgacgcggcgttggggcggaac
tgccggtatcttcaggggccgaacactgaccccgagcgagtcgccgcactccgccgcgcc
atcgaggccgaggagtcggcgtcggtcgaactgctgaactaccgcgcgaacggcgagacg
ttctggaaccgggtcgacgtcgcgccgctgagcgggccggacggcgaggtgacgcactac
gtcggcttccagacggacatcaccgagcgcgtgcgcgcggaggcggccgccgagcgctac
gccgccagagtcgacgaggagcgcgcgcgcctccagacgctcgtcgagcacatcgagggg
ctgttggcggacgtgacgagcgcgctcgtccgcgccgagagcagacaggaactcgaagcg
gccgtctgcgaccgcgtcaccgccgcggggtcgttcgactgcgcgtgggtcggccactgc
gacctctcgccggcggtcatcgttccaaacgagcgggccggaacggacacggagttcctc
gacggcctcgaaatcagccggtcgaatcccgacgaccccaccgctcgcgccgcggagacg
cgggccgtccagtcggcggccgtcggcgacggcagcgtccacgccgagacgctcgtcccg
ttcgactccgtcatcgcggtcccgttggtccacagcgggacgctctacggcgtcctgaca
gtctacaccgatgtcgcggaactcgacgaccaggtccgagtggtgttcgggacactcggg
cgggccgtcggcgcggccatcgacgccttcgagagccggcggtcactgctgtccgacgag
cggctcgaactcgaactcgacgtgcgcgacgagagccagccgttggtccgactcgccgtc
gcgggcgactgcgaactctcgtatcgcggttcggcccaacacgacgacgggaccgtgagt
ctgttcgtctcgacgcaccccgcgaccgagttcgaggaagccgacaccgacctcgacggc
cttcgaagcgtcgacgttctcccccgcggcgacgacgcggaactctacgagctcaccttc
gacgacgggtcgctccttcacctcgtcgccgacgcgggtgggcggctcgtcgacctcgaa
gtagaccgcctcggctgtcggctcacggtcatcatttccgaccgcgtggcgggccgggcg
ctcctcgacgacttgcagacggtcgcggcgaacgccgaactccgctccgtcacgaaccgg
tcggaaccgccggaggcgcgccgcgagttcgtcgcgagcgtcaccgacgacttcaccgac
cgacagcagtcggccctccaactcgcctacctcggcggctacttcgagtggccccacgcc
gtcaccggcgaggaactcgcggagacgatgggcgtctcgcgggcgacgttccaccagcac
ctgcacgccgcggagcgcaaactcatctcccgatttttcgacagcgacccatactag
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