Haloferax volcanii SVX82: SVXHx_0329
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Entry
SVXHx_0329 CDS
T08885
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit B'
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
hln
Haloferax volcanii SVX82
Pathway
hln03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hln00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SVXHx_0329 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hln03021
]
SVXHx_0329 (rpoB)
Enzymes [BR:
hln01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SVXHx_0329 (rpoB)
Transcription machinery [BR:
hln03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
SVXHx_0329 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-ProteinID:
WEL24659
LinkDB
All DBs
Position
305160..306989
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AA seq
609 aa
AA seq
DB search
MAQAQREAKVYVNGSLVGTHPDPNQLAAQIREARRRGDVSQMVNVSVKERTREVIINADA
GRARRPLIVVEDGEPLLDDDHVEALDNDELDFDDLVERGLVEFIDAEEEEDIYVAVDEDE
LNEDHTHLEIDPQLIFGIGAGMIPYPEHNASPRITMGAGMMKQSLGLPAANYRIRPDTRQ
HLMHYPQLSMVKTQTTEQIGFDERPAAQNFVVAVMSYEGFNIEDALVMNKGSVERALARS
HFFRTYEGEERRYPGGQEDHFEIPSQDVRGARGEDAYSHLDEDGLVNPETVVDENSVLLG
KTSPPRFLEEPDDMAGLSPQKRRETSVTMRSGESGVVDTVTLMEGEDGSKLAKVSVRDQR
VPELGDKFASRHGQKGVVGHLAPQEDMPFTADGVVPDLVLNPHALPSRMTVGHVLEMLGG
KVGALEGRRVDGTAFQGENEEELRSALEERGFMSSGKEVMYSGVTGEKIEAEIFVGIIFY
HKLYHMVSNKLHARSRGPVQVLTRQPTEGRAREGGLRLGEMERDTVIGHGAAMVLQERLL
DSSDKEKVYISADTGMVAVEDRDQRRIYDPVTGDEDNIHEIEISYAFKLLLDEMVALGVR
PRIELKDAV
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggcacagcgagaagcgaaagtatacgtcaacggtagtctcgtcgggacccac
ccggaccccaaccaactcgcggcacagattcgagaggcgcgccgccgcggcgacgtgagc
cagatggtgaacgtctccgtcaaagagcgcacccgcgaagtcatcatcaacgccgacgcg
ggccgcgcccgccgtccgctcatcgtcgtcgaagacggcgagccgctcctcgacgacgac
cacgtcgaggcgctcgacaacgacgaactcgacttcgacgacctcgtcgagcgcgggctc
gtcgagttcatcgacgccgaggaggaagaagacatctacgtcgcggtcgacgaggacgaa
ctcaacgaggaccacacgcacctcgaaatcgacccgcagctcatcttcggcatcggtgcc
gggatgattccgtacccggaacacaacgcctcgccccgcattacgatgggggcagggatg
atgaagcagtcgctggggctgcccgcggcgaactaccgcatccgcccggacacccgccag
cacctcatgcactacccgcagctctcgatggtcaaaacgcagaccacggagcaaatcggg
ttcgacgagcgacccgcggcccagaacttcgtcgtggccgtcatgtcctacgagggcttc
aacatcgaggacgcgctcgtcatgaacaagggctccgtcgaacgcgcgctcgcccgctcg
cacttcttccgcacctacgagggcgaagagcgccgctaccccggcggtcaggaagaccac
ttcgagattccgtcgcaggacgtgcgcggcgcgcgcggcgaagacgcgtactcgcacctc
gacgaggacggcctcgtcaaccccgagacggtcgtcgacgagaactccgtgctgctcggc
aagacctcgccgccgcggttcctcgaagaacccgacgacatggcgggactctcgccgcag
aagcgccgcgagacctccgtcacgatgcgctcgggcgaatccggcgtcgtggacacggtc
acgctcatggagggcgaagacggctcgaagctcgccaaggtgtccgtccgcgaccagcgc
gttccggaactcggcgacaagttcgcgtcccggcacggacagaagggcgtcgtgggccac
ctggctccccaggaggacatgcccttcaccgccgacggcgtcgtgcccgacctcgtgctc
aacccgcacgccctgccgtcgcgcatgacggtcggccacgtgctggagatgctcggcggt
aaggtcggtgcgctcgaaggtcgccgcgtcgacggcaccgccttccagggcgaaaacgaa
gaggaactccgctcggcgctcgaagagcgcggcttcatgtcctccggcaaggaggtcatg
tactccggcgtcaccggcgagaagatcgaggccgaaatcttcgtcggcatcatcttctac
cacaagctgtaccacatggtgagcaacaagctgcacgcccgctcgcgcggtcccgtgcag
gtgctcacccgccagccgacggagggtcgcgcccgcgagggtggcctccgtctcggggag
atggagcgcgacaccgtcatcggccacggggccgcgatggtgctccaggagcgcctgctc
gactcctccgacaaggagaaggtctacatctccgccgacaccggcatggtcgccgtcgag
gaccgcgaccagcgccgcatctacgacccggtcaccggcgacgaggacaacatccacgaa
atcgagatcagctacgcgttcaagctgcttctcgacgagatggtcgcgctcggcgtccgc
ccgcgaatcgaactgaaggacgcggtctaa
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