Haloferax volcanii SVX82: SVXHx_0331
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Entry
SVXHx_0331 CDS
T08885
Symbol
rpoA2
Name
(GenBank) DNA-directed RNA polymerase subunit A''
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
hln
Haloferax volcanii SVX82
Pathway
hln03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hln00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SVXHx_0331 (rpoA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hln03021
]
SVXHx_0331 (rpoA2)
Enzymes [BR:
hln01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SVXHx_0331 (rpoA2)
Transcription machinery [BR:
hln03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
SVXHx_0331 (rpoA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
WEL24661
LinkDB
All DBs
Position
309919..311178
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AA seq
419 aa
AA seq
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MTDTDATADYEFVDDAIVDVVESKELSRRLKDRIYQTIEEREGVTLDQAGEIAQAVEARY
LDTRVDPLDPVGTVSAQSIGEPGTQMTMNTFHYAGVAEIDVTQGLPRLIELVDARKTPDT
PMMTVYLEDEYANNRELAHQVVWNIESTKILALGDISTNVADMVVQVNLNDETLLERWPT
YDDEGVVASEIAETIEDALGIKTRREGTLIEFGPESPSYRRLLQLVEELRDIVFKGIEEV
SRVVIRKENNEDTDEEEFVLYTEGSAFGDALAIEGVDASRTTSNNIHEVHKQLGIEAARE
AIIDETMNTLREQGLDDVNIRHLMLVADIMTNDGTIESIGRHGISGSKDSVLARAAFEVT
VNHLLDAAIHGEEDDLDGVIENVIVGKPIAIGTGDVDLRMGSLDVEDADANAAPEPSDD
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgactgataccgacgcaaccgccgactacgagttcgtcgacgacgccatcgtcgacgtc
gtcgagtccaaagagctgtctcgacgcctgaaggaccgcatctaccagaccatcgaagag
cgcgagggcgtcaccctcgaccaggccggcgaaatcgcgcaggccgtcgaggcgcgctac
ctcgacacccgcgtcgacccgctcgaccccgtcgggacggtgtcggcgcagtccatcggt
gagccggggacgcagatgacgatgaacacgttccactacgcgggcgtcgccgaaatcgac
gtcacgcaggggctgccgcggctcatcgagctggtggacgcgcggaagacccccgacacg
ccgatgatgacggtgtacctcgaagacgagtacgcgaacaaccgcgaactcgcccaccag
gtcgtctggaacatcgagtccacgaagattctggcgctcggcgacatctcgacgaacgtc
gccgacatggtcgtgcaggtcaacctcaacgacgagacgctcctcgaacgctggccgacg
tacgacgacgagggcgtcgtcgcgagcgagattgccgaaaccatcgaggacgcgctcggc
atcaagacccgccgcgaggggacgctcatcgagttcggacccgagagcccgagctaccgc
cggctcctccaactcgtcgaggagctgcgcgacatcgtgttcaagggcatcgaggaggtc
tcccgcgtcgtcatccggaaggagaacaacgaggacaccgacgaagaggagttcgtcctc
tacaccgagggctcggcgttcggcgacgcgctcgccatcgagggcgtcgacgcttcccgg
accacctcgaacaacatccacgaggtgcacaagcagctcggcatcgaggccgcccgcgag
gccatcatcgacgagacgatgaacacgctgcgcgagcagggtctcgacgacgtgaacatc
cgccacctgatgctcgtcgcggacatcatgacgaacgacgggaccatcgagtccatcggc
cgtcacggtatctccgggtcgaaggactccgtcctcgcccgcgccgcgttcgaggtcacg
gtcaaccacctgctcgacgccgccatccacggcgaggaagacgacctcgacggcgtcatc
gagaacgtcatcgtcggcaagccgatcgctatcggcaccggcgacgtggacctccgcatg
ggttcgctcgacgtcgaggacgcggacgccaacgcggcacccgaaccgtccgacgactga
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