Haloferax volcanii SVX82: SVXHx_0371
Help
Entry
SVXHx_0371 CDS
T08885
Symbol
uvrD
Name
(GenBank) Superfamily I DNA and RNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hln
Haloferax volcanii SVX82
Pathway
hln03420
Nucleotide excision repair
hln03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SVXHx_0371 (uvrD)
03430 Mismatch repair
SVXHx_0371 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hln03400
]
SVXHx_0371 (uvrD)
Enzymes [BR:
hln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SVXHx_0371 (uvrD)
DNA repair and recombination proteins [BR:
hln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SVXHx_0371 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
SVXHx_0371 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
AAA_22
Herpes_ori_bp
AAA_11
AAA_12
SRP54
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
WEL24700
LinkDB
All DBs
Position
complement(348707..350557)
Genome browser
AA seq
616 aa
AA seq
DB search
MSESDVTVTRLFGGPGSGKTTALLDKVEEILEQDGVTIRDILVVSYTRAAAAEVRDRLAE
RLDINPRSLKGNVSTMHAKAYELLSLSRNDVVGESDKQEFCEDYGIEFEDEYGGAGRRTA
RSTTIGNKVIATSQWLQRTRRDVSDWYDVPFQWNVEEVRLPPEVDPNAQEGNKYTPTWPS
DDDRIDIPEAIRAWRAYKGEHGLVGFADMLERVKQRALVPNVDYLVIDEFQDITTLQYDV
YEEWKPHMRGVLIAGDDDQVVYAWQGADPNLLLDAERDNDEILPNSYRLPSNVLNVVNRE
IRHIDKRQEKDLKPRKEGGAVEAVESPSMLELARNVRYTVEKDEGTVMVLFRARYQMFQF
IDEFLPSGIPFSTLTDQRMWTDRLTQYVRAVEALDAEEPVNGLEARRLADMLQDSAFGTN
DRDDLFDAIDDRQEEVGVDDITNIEFTPKEIKNFAPFAPDSSSASDMVRKVTSFQRKSVN
AYFGGGYEEMDPSRVRVGTIHSAKGREADHVFMATDLTEKVVEQMAASVSDEELEARGIE
EFTATTSPVPLITDNERRVFYVGMSRARERLIVLENLVTGAPTLPISVLLHNEIREEPAQ
ELVDDAQELPAPEPEA
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaatccgacgtgaccgtcacccggctgttcggcggcccgggaagcgggaagacc
acggccttgctcgacaaggtcgaggagattctcgaacaagacggcgtcaccatccgcgac
attctcgtcgtctcttacacccgagccgcggcggccgaggtccgcgaccggctcgctgag
cgactcgacatcaacccccggtcgctgaaggggaacgtctcgacgatgcacgcgaaggcg
tacgaactcttgagcctctcgcggaacgacgtggtcggcgagagcgacaaacaggagttc
tgcgaggactacggcatcgagttcgaagacgagtacggcggcgcgggccgccggaccgcc
cgctcgaccaccatcggcaacaaggtcatcgccacgagccagtggctccagcgcacccgc
cgcgacgtgtccgactggtacgacgtgccgttccagtggaacgtcgaggaggtccgcctc
ccgccggaagtcgacccgaacgcccaagagggcaacaagtacaccccgacgtggccctcc
gacgacgaccgcatcgacatccccgaggccatccgcgcgtggcgcgcctacaagggcgaa
cacgggttggtcggattcgctgacatgctcgaacgcgtcaagcagcgcgcgctcgtcccc
aacgtcgactacctcgtcatcgacgagttccaggacatcacgaccctccagtacgacgtg
tacgaggagtggaagccccacatgcggggcgtcctcatcgccggcgacgacgaccaggtc
gtctacgcgtggcagggcgcggacccgaacctcctcctcgacgccgaacgcgacaacgac
gagattctgccgaactcctaccgcctcccgtcgaacgtcctcaacgtcgtcaaccgagag
attcgccacatcgacaagcgacaggagaaggacctcaagccgcgcaaggaaggcggcgcg
gtcgaggccgtcgagagtccgtcgatgctcgaactcgcccggaacgtccgctacaccgtc
gagaaagacgagggcaccgtgatggtgctgttccgcgcgcgctaccagatgttccagttc
atcgacgagttcctcccgtcgggcatccccttctcgacgctgaccgaccagcgcatgtgg
accgaccgactcacgcagtacgtccgcgcggtcgaggcgctcgacgccgaagagcccgtc
aacgggctggaggcccgccgcctcgcggacatgctccaggactccgcgttcggcacgaac
gaccgcgacgacctgttcgacgccatcgacgacagacaggaggaagtcggcgtcgacgac
atcacgaacatcgagttcacgccgaaggaaatcaagaacttcgcaccgttcgcccccgac
agttcgtccgcgagcgacatggtccgcaaggtgacgagcttccagcgcaagtccgtcaac
gcgtacttcggcggcggctacgaggagatggaccccagccgcgtccgcgtcggcactatc
cactccgcgaagggtcgcgaggccgaccacgtgttcatggcgaccgacctgaccgagaag
gtggtcgagcagatggcggcgtccgtctccgacgaggaactcgaagcccgcggcatcgag
gagttcaccgcgacgacgagtcccgtcccgctcatcaccgacaacgagcgccgcgtcttc
tacgtcgggatgtcccgcgcccgcgagcgcctcatcgtcctcgaaaacctcgtcaccggc
gcgccgacgctccccatcagcgtcctgctccacaacgagattcgcgaggaacccgcgcag
gaactcgtcgacgacgcgcaggaactgcccgcgcccgaaccagaggcgtaa
DBGET
integrated database retrieval system
