Haloferax volcanii SVX82: SVXHx_0587
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Entry
SVXHx_0587 CDS
T08885
Symbol
dppa
Name
(GenBank) ABC-type dipeptide/oligopeptide/nickel transportsystem, periplasmic component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
hln
Haloferax volcanii SVX82
Pathway
hln02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hln00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SVXHx_0587 (dppa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hln02000
]
SVXHx_0587 (dppa)
Transporters [BR:
hln02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
SVXHx_0587 (dppa)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
TAT_signal
UCR_Fe-S_N
Motif
Other DBs
NCBI-ProteinID:
WEL24908
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Position
540803..542524
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AA seq
573 aa
AA seq
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MSQDGNNVSRRRFLTAAGTAAATAALAGCSGGGGEETTTESGEGTTEGETDQTEQTEDDG
SNSVLRYGRGSHSPTLDFQNSTSGEVAKVTEQLYDTLINFEPGQSTLTQGLATEYSLEGE
TASITLREGVMFHNGEEFTAEDFVATYRRFVDSDYEYYAGDDYVSAYGPFTLGSWIDEIQ
VDGDYSMTIQLTQSYAPFLRNLAMFAASVHSLAAIEEYGTELSSNPVGTGPFQLSNLDDA
NEIIRLEANSEYWGDGPNVDEVVFVTIGQNSTRAQSLASGELDIIDGLGAQSSVQVENAS
NANLVRTEGINIGYMAFNMASREEFRDRRVRQAVSHAINTEAIVNEIYSGFATQASQPLP
PNVLGHNDDIDPYPYDPEEAQRLLEEAGYGDGFSFELATFQNPRGYNPSPIQTAETVASN
LGEIGIEVDINQQSFGPFLEYTAQGRHDACFLGWYTDNADPDNFMYVLLHPQVEESELTE
GQDWVSFDAEGYNTSNRSAWANREYMDLVEQGQSTYDEAERESLYNEANQIAHDEAPWVY
LDYADELRGVSSRVSGFQVAAISGPYLNLVSLN
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagatggcaataacgtctcgcggcgtcggttcctgacggccgcgggaaccgct
gcggcgacggccgcgctggcgggttgttccggcggcggcggcgaggaaaccaccaccgaa
tccggtgaggggaccaccgagggagagacggaccagaccgaacagaccgaagacgacggt
tcgaactcggtcctgcgctacggtcgcggcagtcactcgccgacgctcgacttccagaac
agcacgagcggcgaggtcgccaaggtgaccgaacagctctacgacacgctcatcaacttc
gagccggggcagtccacgctgacccaggggctcgccaccgagtactccctggagggcgag
acggcctccatcacgctccgcgagggcgtgatgttccacaacggcgaggagttcacggcc
gaggacttcgtggcgacctatcgccgcttcgtcgacagcgactacgagtactacgccggc
gacgactacgtctccgcctacgggccgttcaccctcggctcgtggatcgacgagattcag
gtcgacggcgactactcgatgacgattcagctgacccagtcgtacgcgccgttcctgcgt
aatctggcgatgttcgcggcgtcggtgcactccctcgccgccatcgaggagtacgggacg
gaactcagttcgaaccccgtcgggacggggccgttccagctgagtaacctcgacgacgcg
aacgaaatcatccgcctcgaagccaactccgagtactggggcgacgggccgaacgtggac
gaggtcgtcttcgtcaccatcggccagaactcgacgcgcgcgcagtcgctcgcgtcgggc
gaactcgacatcatcgacgggctcggtgcgcagtcgtccgtccaggtcgaaaacgccagc
aacgcgaacctcgtccgcaccgagggtatcaacatcggctacatggcgttcaacatggcg
agccgcgaggagttccgcgaccgccgcgtccggcaggccgtcagtcacgccatcaacacc
gaagccatcgtcaacgagatttactcgggcttcgcgacgcaggcgagccagccgctcccg
ccgaacgtcctcggccacaacgacgacatcgacccgtacccgtacgaccccgaggaggcc
cagcgcctcctcgaagaggccggctacggcgacggcttctcgttcgaactggcgacgttc
cagaacccccgcggctacaacccgtcgccgattcagaccgccgagaccgtcgcgtccaac
ctcggcgaaatcggcatcgaagtcgacatcaaccagcagtcgttcggtccgttcctcgaa
tacaccgctcagggccgccacgacgcgtgtttcctcggctggtacaccgacaacgccgac
ccggacaacttcatgtacgtcctcctgcacccgcaggtagaggagagcgaactcacggag
ggacaggactgggtcagcttcgacgccgaaggctacaacaccagtaaccgctcggcgtgg
gcgaaccgcgagtacatggacctcgtcgaacagggtcagagcacctacgacgaggccgag
cgcgagtcgctgtacaacgaggcgaaccagattgcacacgacgaggccccgtgggtctac
ctcgactacgcggacgagcttcgcggcgtctccagccgcgtcagcgggttccaggtcgcc
gccatcagcggtccgtacctcaatctggtcagcctgaactga
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