Haloferax volcanii SVX82: SVXHx_0648
Help
Entry
SVXHx_0648 CDS
T08885
Symbol
smc
Name
(GenBank) Chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
hln
Haloferax volcanii SVX82
Brite
KEGG Orthology (KO) [BR:
hln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hln03036
]
SVXHx_0648 (smc)
Chromosome and associated proteins [BR:
hln03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
SVXHx_0648 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_13
AAA_21
ATG16
DUF724
DUF1664
MscS_porin
Crescentin
APG6_N
AAA_29
ERM_helical
EzrA
CCDC113_CCDC96_CC
DUF4200
Exonuc_VII_L
TPR_MLP1_2
WEMBL
GAS
KASH_CCD
ABC_tran_CTD
Fib_alpha
IFT57
CENP-F_leu_zip
ACBP4_C
Laminin_II
Lebercilin
DUF4407
Tropomyosin
OVT1
CEP63
NPV_P10
Seryl_tRNA_N
FlaC_arch
Wtap
Fez1
Snapin_Pallidin
ATG14
ADIP
Filament
ATG17_like
DUF2721
BST2
Motif
Other DBs
NCBI-ProteinID:
WEL24968
LinkDB
All DBs
Position
597675..601397
Genome browser
AA seq
1240 aa
AA seq
DB search
MHIKELVLDGFKSFGRPTRIPFYEDFTVVTGPNGSGKSNIIDGVLFALGLARTRGIRAEK
LTDLIYNPGHADGSDEAPDKPKEASVTVVLDNSEGTLDRSQVVNAAGTDKVGGVEEITIK
RRVKETPDNYYSYYYLNERSVNLSDIKDLLAQAGITPEGYNVVMQGDVTEIINMTPYQRR
GIIDEIAGVAEFDEKKDAAFEELEAVEERVDEADLRIEEKETRLDQLADERETALTYKGL
REEKEEYEGYLKAAELEDKREDLSRTESRIESTEADLEALQAELDERQGKVTRLEEDLED
LTREIERKGEDEQLRIKSEMEEIKGDISRLENAIEAAEEKRDDAEAERRKAFVDIDRKQE
QIDDLEDDIREVKVEKASVKSDIQSKRVELSEVQAEIDSVDTEFDELKSELAERKETLDE
LKDEKNDRQRAKDRLLDDARRRSNQISETRDELERARERIPELKATVSDLHSELDTAEKN
EAKIDGVIEDLQAEKADLNDELSEVTDELQTKQSEYARLEARAGKDGDNSWPRAVTTILN
AGISGVHGAVGQLGSVDGEYAKACETAAGGRLANVVVDDDGVGSSCIDHLKSRNAGRATF
LPITKMDNRSLPREPDNPGVVDFARNLVDYDSQYESIFSYVLGSTLVVEDMETARDLMGD
YRMVTLDGDLVERSGAMTGGSGGGSRYSFSKSGEGKLDRLAKEITKLEDRRRSLNEEIRD
IDDDLDDARGRASDAADRVRTIEREIEDAEEDIEEAEAEIDRLEDRLDELQSERESVDEQ
MSDLDDEIADLDDEIETVEAEIEDIEAELADSEIPELTARADEIRADIDDLEDRMSTLDG
RLNEIQLEKQYAEDAVDDLHDTVEAAQNRKAEARESISEAESKIEEREDDLEAKREAVAE
LEEELVDLKEDRTELQDDLREARSARDEKKDRVNAVESKLESMRSAAERLEWEIDELQSQ
VGDYDPDEIPDHDTVESEIERLTEEMEELEPVNMLAIDEYDDVKADLEALQERRDVLVEE
RDAIADRIDQYESQKKATFMESFDAIAENFTDIFERLSNGTGHLQLENPDDPFEEGLTMK
AQPGDKPIQRLDAMSGGEKSLTALAFIFAIQRHNPAPFYALDEVDAFLDAANAERVGQMV
DDLAGDAQFVVVSHRSALLERAERAIGVTMQGDNVSAVTGIQFGGDGGAGSDGGDGRDAD
GSGGDDSGDSDGGDCPDDDADGGDGGEADADVEAEVPADD
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcaaagagctcgtccttgacggtttcaagagcttcgggcggccgactcgcatc
ccgttctacgaggatttcacggtcgttacgggcccgaacggttccggtaaatcgaacatc
atcgacggcgtcctcttcgcgctcggcctcgcccgcacccgcgggattcgcgccgagaag
ctgacggacctcatctacaaccccggccacgccgacggcagcgacgaggcccccgacaag
cccaaggaggccagcgtcacggtcgtcctcgacaactccgaggggacgctcgaccgctcg
caggtcgtcaacgccgccggcaccgacaaagtcggcggcgtcgaggagataactatcaag
cgccgcgtcaaggagacgccggacaactactactcgtactactacctcaacgagcgctcg
gtcaacctctcggacatcaaggacctgctcgcgcaggcgggcatcactcccgagggctac
aacgtcgtcatgcagggcgacgtgaccgaaatcatcaacatgacgccctaccagcggcgg
ggcatcatcgacgaaatcgcgggcgtcgccgagttcgacgagaagaaagacgccgccttc
gaggagttggaggcggtcgaagagcgcgtcgacgaggcggacctccgcatcgaggaaaag
gagacgcgactcgaccagctcgcagacgagcgcgagacggcgctcacctacaagggactc
cgcgaggagaaagaagagtacgagggctacctgaaggccgcggaactcgaagacaagcgc
gaggacctctcgcggaccgaatcgcgcatcgagtccactgaagccgacctcgaagcgtta
caggccgaactcgacgagcgacaggggaaagtcactcgcctcgaagaggacctcgaagac
ctcacccgcgaaatcgagcgcaagggcgaggacgaacagctccgcatcaagtcggagatg
gaggagataaagggcgacatctcccggctggagaacgccatcgaggccgccgaggagaag
cgcgacgacgccgaggccgagcgccgcaaggcgttcgtcgacatcgaccgcaagcaagaa
cagattgacgacctcgaagacgacatccgcgaggtcaaagtcgagaaggcgtcggtcaaa
agcgacatccagtccaagcgggtcgaactctccgaggtgcaggccgaaatcgactcggtg
gacaccgagttcgacgagctgaagtccgaactcgcggagcgaaaggagacgctcgacgag
ctcaaagacgagaagaacgaccgccagcgcgccaaggaccgcctgctcgacgacgcgcgc
cgccgctcgaaccagatctcggagacccgggacgaactcgaacgcgcccgcgagcgcatc
cccgaactgaaggcgaccgtctccgacctgcacagcgaactcgacaccgccgagaagaac
gaggcgaagatagacggcgtcatcgaggacttgcaggccgagaaggccgacctgaacgac
gaactgtccgaggtcacggacgaactccagaccaagcagtccgagtacgcccgcctcgaa
gcccgagccggcaaggacggtgataactcgtggccccgcgccgtcacgaccatcctcaac
gccggcatctccggcgtccacggcgcggtcggccaactcggctccgtcgacggcgagtac
gcgaaagcctgtgagacggccgccggcggtcgcctcgccaacgtcgtcgtcgacgacgac
ggcgtggggtcgtcctgtatcgaccacctgaagtcccgcaacgcgggccgcgcgacgttc
ctgcccatcacgaagatggacaaccggagcctgccgcgcgagcccgacaaccccggcgtc
gtggacttcgcgcgcaacctcgtcgactacgattcgcagtacgagtcgattttctcgtac
gtcctcgggtcgacgctcgtcgtcgaggacatggagaccgcccgcgacctgatgggcgac
taccgcatggtcaccctcgacggcgacctcgtggagcgctccggcgcgatgaccggcggc
tccggcggcggctctcgctactcgttttcgaagtccggcgagggcaaactcgaccgcctc
gcgaaggagattacgaagctcgaagaccgccgccgctcgctcaacgaggagattcgcgac
atcgacgacgacctcgacgacgcccgcgggcgggcttccgacgccgccgaccgcgttcgg
accatcgagcgcgaaatcgaggacgccgaggaggatatcgaggaggccgaagccgaaatc
gaccggctcgaagaccgcctcgacgaactccagtccgaacgcgagtcggtggacgaacag
atgtccgacctcgacgacgaaatcgccgacctcgacgacgaaatcgagacggtcgaggcc
gaaatcgaggacatcgaagccgaactcgcggactccgagattccggaactcaccgcccgc
gccgacgagattcgcgcggacatcgacgacctcgaagaccggatgtccacgctcgacggc
cggctcaacgagattcaactcgaaaagcagtacgccgaggacgcggtcgacgacctccac
gacacggtcgaggccgcccagaaccgcaaggccgaggctcgggagtccatctccgaggcg
gagtccaaaatcgaggagcgcgaggacgacctcgaagccaagcgcgaggcggtcgccgaa
ctcgaggaggaactggtcgacctcaaggaggaccgcacggagctccaagacgacctccgc
gaagctcggagcgcccgcgacgagaagaaagaccgggtgaatgcggtcgaatccaagctc
gaaagcatgcgctcggccgccgaacggctcgaatgggaaatcgacgaactccagtcgcag
gtcggtgactacgaccccgacgagattcccgaccacgacacggtcgagtcggaaatcgag
cgactcaccgaggagatggaggaactcgaaccggtcaacatgctcgctatcgacgagtac
gacgacgtgaaagccgacctcgaagccctccaggagcgccgcgacgtgctggtcgaagag
cgcgacgccatcgccgaccgcatcgaccagtacgagtcccagaagaaggcgacgttcatg
gagtcgttcgacgccatcgccgagaacttcacggacatcttcgagcgcctgtcgaacggg
acggggcacctccagttagagaaccccgacgaccccttcgaggagggcctgacgatgaag
gcccagccgggcgacaagcccatccagcgcctcgacgccatgtccggcggcgagaagtcg
ctgacggcgctcgcgtttatcttcgccatccagcggcacaaccccgcgccgttctacgcg
ctcgacgaggtggacgccttcctcgacgccgcgaacgccgagcgcgtcggccagatggtc
gacgacctcgcgggcgacgcccagttcgtcgtcgtctcgcaccgctctgcgctcctcgaa
cgcgccgagcgcgctatcggcgtgacgatgcagggcgacaacgtcagcgcggtcacgggt
atccagttcggcggcgacggcggggctggaagcgacggcggtgacggccgcgacgcggac
ggctcgggcggcgacgactccggcgactccgacggcggcgactgccccgacgacgacgcg
gacggtggtgacggcggcgaggccgacgcggacgtggaagcggaggttccggcggatgac
tga
DBGET
integrated database retrieval system
