Haloferax volcanii SVX82: SVXHx_0677
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Entry
SVXHx_0677 CDS
T08885
Symbol
nusg
Name
(GenBank) Transcription antiterminator NusG
KO
K15172
transcription elongation factor SPT5
Organism
hln
Haloferax volcanii SVX82
Pathway
hln03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hln00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
SVXHx_0677 (nusg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hln03021
]
SVXHx_0677 (nusg)
03019 Messenger RNA biogenesis [BR:
hln03019
]
SVXHx_0677 (nusg)
Transcription machinery [BR:
hln03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
SVXHx_0677 (nusg)
RNA polymerase I system
SVXHx_0677 (nusg)
Messenger RNA biogenesis [BR:
hln03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
SVXHx_0677 (nusg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
Ribosomal_uL24m-like
KOW4_SPT5
SH3_KIN17_C
KOW5_SPT5
Glyco_hydro_65C
KOW2_Spt5
Motif
Other DBs
NCBI-ProteinID:
WEL24996
LinkDB
All DBs
Position
624311..624763
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AA seq
150 aa
AA seq
DB search
MPIFAVKTTARQEQTVADMIATKEFEQIHAVLAPDSLTSYVMVEADDDGIVTRVLEEIPH
ARGLVESGGAVGTSSMAEVEHFLSPTPDVEGIAEGDIVELIAGPFKGEKARVQRIDETKD
QVTVELYEATVPIPVTVRGDQIRVLDSEER
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcttcgccgtgaagaccactgctcgccaggagcagacggttgcggacatgatc
gcgacgaaggagttcgaacagattcacgccgtcctcgcgcccgactcgctcacgagctac
gtgatggtcgaggccgacgacgacggcatcgtcacgcgtgtcctcgaagagattccccac
gctcgcggcctcgtcgagagcggcggcgcggtcggcacctccagcatggccgaagtcgag
cacttcctctcgccgacgccggacgtggagggtatcgcggagggcgacatcgtcgagctc
atcgccggcccgttcaaaggcgagaaggcgcgagtccagcgcatcgacgagacgaaagac
caggtcaccgtcgaactgtacgaggcgacggttccgattccggtcaccgtccgcggcgac
cagattcgcgtcctcgactccgaagagcggtaa
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