KEGG   Haloferax volcanii SVX82: SVXHx_1299
Entry
SVXHx_1299        CDS       T08885                                 
Symbol
lhr
Name
(GenBank) ATP-dependent helicase Lhr and Lhr-like helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
hln  Haloferax volcanii SVX82
Brite
KEGG Orthology (KO) [BR:hln00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hln03400]
    SVXHx_1299 (lhr)
Enzymes [BR:hln01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SVXHx_1299 (lhr)
    5.6.2.6  RNA 3'-5' helicase
     SVXHx_1299 (lhr)
DNA repair and recombination proteins [BR:hln03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    SVXHx_1299 (lhr)
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C WH_Lhr ResIII AAA_25 AAA_19 Cas3-like_C_2 DEXQc_Suv3 DmmA-like_C HypA IBR
Other DBs
NCBI-ProteinID: WEL25610
LinkDB
Position
complement(1197838..1200678)
AA seq 946 aa
MPDGEAAAGMDAFATLSSPVRNALSERGFTTPTEPQRRAIPPLADGKHGLIIAPTGTGKT
ETAMLPVFSAIADAEDRFGVSALYITPLRALNRDMRERLDWWGEQLDIDIDVRHGDTTQY
QRQKQANDPPDVLVTTPETLQAMLTGKKLRKALSDVHHVVVDEVHELASAKRGAQLTIGL
ERLRELAGAFQRIGLSATVGSPDEVGKFLTGDRPFEVIEVDVDNRVEFEVVRPEVTNEDE
ALAGKLATDPEIASHVRTIRDIVRDHESVLVFVNTRQTAEALGSRFKSLGDPIEVHHGSL
SKDVRIDVEDRFKAGELDALICTSSMELGIDVGRVDHVVQYNSPREVSRLLQRVGRAGHR
LGVVSRGTVVTDHPDDTLEALAIARRAVSGEVEPARVHHGSLDTVANQIVGVVMDYGDVS
ARRAYEIITRAYPFRDLDEDDFRAVVRELSGNHLLWLDEDKDLLEKSGGTWQYFYANLSM
IPDEETYDVHDISSRRQIGTLDEKFVLNFAAPGATFIQRGEMWRVNDVDDEEARVNVSPI
EDPGGEVPSWVGSEIPVPAPVAGEVGELRDVAAPQFESGADREAVARDIAMRYPTDEATV
RSALGPIEKQVEADAPIPTANRLVLEGSPRKVTLNSPYGHRVNETLGRLLSALIGQRTGS
SVGMEVDPYRVEFDVPGKVRPTTFAEVLRGTDPDHVEALLELALKRSDSLKFTLAQVAAK
FGALKRYQGTGRFGGDRLLAALEDTPVYDEAVREVFHTDLAVEETVELLRRVRDGDVELA
VAREPTAIGTGGRGSGTDLLVPENADASVIETVRDRIQNDRVLLACLHCKDWTRKTKVKR
VREPVTCPECGATRVAALNPWDDETVKAVRAPEKDDEQERLTKRAYRSASLVQAHGERAV
VALAARGVGPHNAARIINKLREDEDDFYRDILEREREYARTQSFWD
NT seq 2841 nt   +upstreamnt  +downstreamnt
atgccagacggcgaggccgccgccggaatggacgccttcgcgacgctctcgtcgcccgtt
cggaacgcgctctcggagcgcggcttcacgacgcccaccgagccgcagcgccgggcgatt
cccccgcttgcggacgggaaacacggcctcatcatcgcgcccacgggcaccggcaagacc
gagacggcgatgctgccggtgttttcggccatcgccgacgccgaggaccgattcggggtt
tcggcgctctacatcaccccgcttcgggcgctgaaccgcgacatgcgcgagcgactcgac
tggtggggcgaacagctcgacatcgacatcgacgttcgccacggcgacaccacgcagtac
cagcgccagaagcaggcgaacgacccgccggacgtgctggtgacgacgcccgagacgttg
caggcgatgctcacggggaagaagctcagaaaggccctctccgatgtgcatcatgtcgtc
gtcgacgaggtccacgaactcgcgtcggccaagcgcggcgcgcagttgacaatcggtttg
gagcgcctccgcgagttggccggggcgttccagcgaatcggcctctcggcgacggtcggg
tcgcccgacgaggtcgggaagttcctgaccggcgaccgcccgttcgaggtcatcgaggtc
gacgtggacaaccgcgtcgagttcgaggtggtccgtcccgaggtgacgaacgaggacgag
gcgctggcggggaaactcgccaccgaccccgagatagcgagtcacgtccggacgattcga
gatatcgtccgcgaccacgagtcggtgctcgtcttcgtcaacaccagacagaccgcggag
gcgctcggctcgcggttcaagtcgctcggcgaccccatcgaggtccaccacggctcgctg
tcgaaggacgtgcgcatcgacgtggaagaccgcttcaaggccggcgagttggacgcgctc
atctgcacgtcgtcgatggaactcggtatcgacgtgggccgggtggaccacgtcgtccag
tacaacagtccgcgcgaggtgtcgcggctcctccagcgagtcggtcgcgcgggccaccgc
ttgggcgtcgtctcccgcgggaccgtcgtcaccgaccaccccgacgacacgctcgaagcg
ctcgccatcgcccggcgggccgtctccggcgaggtcgaacccgcccgcgtccaccacggc
agcctcgacaccgtcgccaaccaaatcgtcggcgtcgtcatggactacggcgacgtgtcg
gcccgccgcgcctacgagattatcacgcgggcgtaccccttccgcgacctcgacgaggac
gacttccgcgccgtcgtccgcgagctttcggggaaccacctcctctggctcgacgaggac
aaggacctcctcgagaagtccggcggcacgtggcagtacttctacgccaacctctcgatg
attcccgacgaggagacctacgacgtccacgacatctcctcgcgccggcagatcgggacg
ctcgacgagaagttcgtcctcaacttcgccgcgccgggcgcgacgttcatccagcgcggc
gagatgtggcgcgtcaacgacgtggacgacgaggaggcgcgggtgaacgtctcgcccatc
gaggaccccggcggcgaggtgccgtcgtgggtcggctcggagattccggtgcccgcgccg
gtcgccggcgaggtgggcgaactccgcgacgtggccgcaccgcagttcgaatccggggcc
gaccgcgaggccgtcgcccgcgacatcgccatgcgctacccgaccgacgaggccacggtc
aggtcggcgctcggccccatcgagaaacaggtcgaggccgacgcgccgattccgaccgcg
aacaggctcgtcctcgaaggctcgccccggaaggtgacgctgaactcgccgtacggccac
cgggtgaacgagacgctcggcaggctcctgtcggcgctcatcggccagcggaccggctcc
tcggtcggcatggaggtcgacccctaccgcgtcgagttcgacgtgccggggaaggtccgc
ccgacgacgttcgccgaggtgctccgcgggaccgaccccgaccacgtcgaggcgctgctc
gaactcgcgctcaagcggtcggactcgctgaagttcacgctcgcgcaggtggccgcgaag
ttcggcgcgctcaagcgctatcaggggacgggccgcttcggcggcgaccgcctcctcgcc
gcgctggaggacacgcccgtctacgacgaggccgtccgcgaggtgttccacaccgacctc
gccgtcgaggagacggtcgaactgctccgccgcgtccgcgacggcgacgtggaactcgcc
gtcgcccgcgaaccgaccgccatcggcaccggcggccgcgggtcggggaccgacctgctc
gttcccgagaacgccgacgcgagcgtcatcgagacggtccgcgaccggattcagaacgac
cgcgtgctgttggcgtgtctccactgcaaggattggactcgcaagacgaaggtcaagcgc
gtccgcgagcccgtgacgtgccccgagtgcggcgcgacccgcgtcgccgcgctcaatccg
tgggacgacgagacggtgaaagcggttcgcgcgccggagaaagacgacgaacaggagcgg
ctgacgaagcgggcctaccgctcggcgagtctggtgcaggcccacggcgagcgggcggtc
gtcgcgctcgcggcccgcggcgtcggcccgcacaacgccgcgcgcatcatcaacaaactc
cgcgaggacgaagacgacttctaccgcgacatcctcgaacgggagcgcgagtacgcccgc
acgcagtcgttctgggactga

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