Haloferax volcanii SVX82: SVXHx_1428
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Entry
SVXHx_1428 CDS
T08885
Symbol
sua7-5
Name
(GenBank) Transcription initiation factor TFIIB, Brf1 subunit/Transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
hln
Haloferax volcanii SVX82
Pathway
hln03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hln00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SVXHx_1428 (sua7-5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hln03021
]
SVXHx_1428 (sua7-5)
Transcription machinery [BR:
hln03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
SVXHx_1428 (sua7-5)
Prokaryotic type
Archaeal type
TFB
SVXHx_1428 (sua7-5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_LysW
Ribosomal_S27e
A2L_zn_ribbon
Zn_ribbon_PaaD
Trm112p
Zn_ribbon_8
Zn_Ribbon_YjdM
Zn_ribbon_RRN7
DUF8106
Sigma70_r4
Lar_restr_allev
Zn_ribbon_tTFIIB
Cyclin_C
Zn_ribbon_3
Zn_ribbon_Elf1
Zn_ribbon_IS1595
Cyclin_N
DUF5817
Zn_ribbon_Brz
Motif
Other DBs
NCBI-ProteinID:
WEL25738
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All DBs
Position
1320528..1321481
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AA seq
317 aa
AA seq
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MERPSRQRQREEEATAQEDEQVNCPECGSDQIVTDADQGELVCDDCGLVLDERQIDRGPE
WRAFNHSERQSKSRVGAPITETMHDRGLTTTIDWKDKDAYGRSLSSEKRSQMHRLRKWQE
RIRTKDAGERNLQFALSEIDRMASALGVPRSVREVASVIYRRALNEDLIRGRSIEGVATS
ALYAACRQEGIPRSLDEVAEVSRVPQKEIGRTYRYISQELGLELKPVDPKQFVPRFASAL
DLSEEVQAKATEIIDVSAEQGLLSGKSPTGFAAAAIYAASLLCNEKKTQREVADVAQVTE
VTIRNRYQEQIEAMGFR
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggaacgtccgagccggcagcgtcaacgagaggaggaggcaacggcacaagaggacgag
caagtcaactgtccggagtgcggctctgaccagatcgtcacggacgcagaccagggggag
ctggtgtgtgacgactgcggactcgtcctcgacgagcgacagattgaccgcggtccggag
tggcgggcgttcaaccactccgagcggcagtcgaagtcgcgcgtcggtgcgcccatcacc
gaaacgatgcacgaccgggggctgacgacgaccatcgactggaaggacaaagacgcctac
ggtcgctcgctttcgtccgagaaacgctcgcagatgcaccgcctgcgcaagtggcaagag
cgcatccgaaccaaggacgccggcgagcgcaacctccagttcgccctcagcgaaatcgac
cgcatggcctcggcgctcggcgtcccccggtcggtccgcgaggtcgcctcggtcatctat
cgacgcgcgctcaacgaggacctgattcgcggccgctccatcgagggcgtcgccacctcg
gcgctgtacgccgcttgccgtcaggaaggtatcccgcgctcgctcgacgaggtcgcggaa
gtgtcgcgcgtcccgcagaaggaaatcgggcgtacgtaccgctacatctcgcaggaactc
gggctcgaactcaagcccgtcgaccccaagcagttcgtcccgcggttcgcctccgcgctc
gacctctccgaggaggtccaggcgaaggcgaccgaaatcatcgacgtgtccgccgagcag
ggcctgctgtcggggaagtcgccgaccggcttcgccgccgccgccatctacgccgcgtcg
cttctctgcaacgaaaagaagacccaacgcgaggtcgcggacgtggcgcaggtgacggag
gtcaccatccgcaaccgctaccaagaacagatcgaagcgatgggcttccgctga
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