Haloferax volcanii SVX82: SVXHx_1637
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Entry
SVXHx_1637 CDS
T08885
Symbol
alka
Name
(GenBank) 8-oxoguanine DNA glycosylase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
hln
Haloferax volcanii SVX82
Pathway
hln03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SVXHx_1637 (alka)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hln03400
]
SVXHx_1637 (alka)
Enzymes [BR:
hln01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SVXHx_1637 (alka)
DNA repair and recombination proteins [BR:
hln03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SVXHx_1637 (alka)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
OGG_N
NodI_C
Motif
Other DBs
NCBI-ProteinID:
WEL25946
LinkDB
All DBs
Position
complement(1521917..1522831)
Genome browser
AA seq
304 aa
AA seq
DB search
METGVIDLGSLDGAFDLQSTLESGQSYLWDRPDGRMYERDAAHGGDAWYQTVVPPLDGVS
DESAVVRVRQTDGALEWESNVDAVPLLIHLLRLDDDLDAIVSEMPDEPLVRRAYEAYPGM
RLVRDPPFGCLVSFICSAQMRVSRIFGMQSRLRETYGERVEFDGETYFAYPTPERLAEAT
EDELRDLSLGYRAPYVRRTAEMVATGEATPAEARGRDYEDAREFLTTFVGVGDKVADCVL
LFSLDYLEAVPLDTWIRSAIEEHYPDCDRGNYADTSRAIRERLGGRYAGYTQTYVFHYLR
SGGE
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggagacgggtgtcatcgacctcgggagcctcgacggagcgttcgacctccaatcgacg
ctggaaagcggccagtcgtacctctgggaccgccccgacggccggatgtacgagcgcgac
gcggcccacggcggcgacgcgtggtaccagacggtcgtcccgccgctcgacggcgtctcc
gacgagtccgccgtcgtcagggtccgccagaccgacggcgcgctggagtgggagtccaac
gtcgacgccgtcccgcttctcatccacttgctccgcctcgacgacgacctcgacgccatc
gtctcggagatgcccgacgaaccgctggtccggcgggcctacgaggcgtacccggggatg
cgactcgtccgcgacccgccgttcggctgtctcgtctcgttcatctgctcggcgcagatg
cgcgtctcgcgcatcttcgggatgcagtcgcggctcagagagacctacggcgagcgcgtc
gagttcgacggcgagacgtacttcgcgtacccgacccccgagcgactggccgaagccacc
gaagacgaactgcgcgacctcagcctcggctaccgcgcgccgtacgtccggcggacggcc
gagatggtcgccacgggcgaggcgacgcccgccgaggcccgcggccgcgactacgaggac
gcccgcgagttcctgacgacgttcgtcggcgtcggtgacaaggtcgcggactgcgtcctg
ttgttctcgctcgactacctcgaagccgtcccgctcgacacgtggattcggtcggccatc
gaggaacattaccccgactgcgaccgggggaactacgccgacacctcgcgggccatccgc
gagcgcctcggcggtcgctacgccggctacacccagacgtacgtgtttcactaccttcgc
tcaggcggggagtga
DBGET
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