Haloferax volcanii SVX82: SVXHx_1683
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Entry
SVXHx_1683 CDS
T08885
Symbol
spt15-2
Name
(GenBank) TATA-box binding protein (TBP), component of TFIID and TFIIIB
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
hln
Haloferax volcanii SVX82
Pathway
hln03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hln00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SVXHx_1683 (spt15-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hln03000
]
SVXHx_1683 (spt15-2)
03021 Transcription machinery [BR:
hln03021
]
SVXHx_1683 (spt15-2)
Transcription factors [BR:
hln03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
SVXHx_1683 (spt15-2)
Transcription machinery [BR:
hln03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
SVXHx_1683 (spt15-2)
RNA polymerase III system
TFIIIB
SVXHx_1683 (spt15-2)
RNA polymerase I system
SL1/TIF-1B
SVXHx_1683 (spt15-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-ProteinID:
WEL25990
LinkDB
All DBs
Position
complement(1581454..1582014)
Genome browser
AA seq
186 aa
AA seq
DB search
MSGPADSIEIQNVVASTGIGQELDLEALADDLPGADFNPDNFPGLVYRTQDPKAAALIFR
SGKIVCTGAKSIDDVHDALGIIFDKLRELKIPVDDEPEITVQNIVSSADLGHNLNLNALA
IGLGLEDVEYEPEQFPGLVYRMDEPKVVILLFGSGKIVITGGKRTDDAETAVEEIVERID
ALGLLG
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgagtgggccggcagactccatcgagattcagaacgtagtcgcatcgaccgggatcggt
caggagctcgacctcgaagccctcgccgacgacctccccggtgcagatttcaacccggac
aacttcccgggcctcgtctatcgcacccaggacccgaaagccgctgcgctcatcttccgg
tcggggaagatcgtgtgcacgggcgcgaaaagtatcgacgacgtgcacgacgctctcggg
attatcttcgataagctccgtgagctgaagattcccgtcgacgacgagccagagataacc
gtccagaacatcgtttccagcgcggacctcggacacaacctgaacctgaacgcgctggcc
atcgggctcggtctcgaagacgtcgagtacgagccggagcagttccccggcctcgtctac
cggatggacgagccgaaagtcgttatcctcctcttcggttccgggaaaatcgtcatcacc
ggaggaaagcggacggacgacgcggaaaccgccgtcgaggaaatcgtcgagcgcatcgac
gcgcttggactgctcggctag
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