Haloferax volcanii SVX82: SVXHx_1711
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Entry
SVXHx_1711 CDS
T08885
Symbol
phrb
Name
(GenBank) Deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hln
Haloferax volcanii SVX82
Brite
KEGG Orthology (KO) [BR:
hln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hln03400
]
SVXHx_1711 (phrb)
Enzymes [BR:
hln01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SVXHx_1711 (phrb)
DNA repair and recombination proteins [BR:
hln03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SVXHx_1711 (phrb)
Prokaryotic type
SVXHx_1711 (phrb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WEL26013
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All DBs
Position
complement(1605807..1607261)
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AA seq
484 aa
AA seq
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MQLHWHRRDLRVADNRGLATAAEAGPVAPLFVFDRDVLDHAGAPRVRYLLDALSELRDAY
RERGSDLLVARGDPRTVVPAVAAALDAERAVWGIDYSGLARERDADVRLALDEAGVAREP
VHDAIFHPPGSITTNAGDTYSVYTYFWKKWRDRDKPDPYPEPDADDLADAATLESAAEDL
TNGDAEFDIAVGGLPTISDLGFEEPSASVQSAGTEAARERLSAFCADAIYRYADDRDYPT
RDATSRLSTDLKFGTIGIREVYAATAAAREGVGGERDESVEEFQSQLAWREFYAHVLREH
PNVVTENYKEYEEDIAWRDDDEELAAWKAGETGYPIVDAGMRQLREEAYMHNRVRMIVAS
FLTKDLLCDWRHGYAHFREHLADHDTANDNGGWQWAASTGTDAQPYFRIFNPMTQGERYD
PDGEYIKRYVPELSDVTANTIHEWHELTDLERERLAPDYPEPIVDHADRRERAISMFEAA
RGDD
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgcactggcaccgccgggacctgcgcgtcgcggacaaccgcggcctcgcgacg
gccgcggaggcgggccccgtcgccccgcttttcgtcttcgaccgggacgtgctcgaccac
gccggcgcgccccgcgtcaggtacctgctcgacgcgctttccgagctccgcgacgcctac
cgagagcgcgggagcgacctgctcgtcgcccgcggcgacccccggacggtcgtgccggcg
gtggcggcggcgctcgacgccgagcgggccgtgtggggtatcgactactccgggctcgcc
cgcgagcgcgacgcggacgtgcggctcgccctcgacgaggccggcgtcgcccgcgagccg
gtccacgacgccatcttccacccgccggggagcatcacgacaaacgctggcgacacctac
tccgtctacacctacttctggaagaagtggcgcgaccgcgacaagcccgacccgtacccg
gagccggacgccgacgacctcgccgacgccgccacgctcgaatccgcggccgaagacctc
accaacggcgacgcagagttcgacatcgccgtcggcggcctcccgaccatctcggacctc
ggcttcgaggagccgtcggcatcggtccagtcggcggggaccgaggcggcccgcgagcgc
ctctcggcgttctgcgcggacgccatctaccgctacgccgacgaccgcgactacccgacg
cgggacgccacgtcgcggctctcgacggacctcaagttcgggaccatcggcatccgcgag
gtgtacgcggcgaccgccgcggcccgcgagggcgtcggcggcgagagagacgagtccgtc
gaggagttccagtcgcagttggcgtggcgggagttctacgcccacgtcctccgagagcat
ccgaacgtcgtcacggagaactacaaggagtacgaggaggacatcgcgtggcgcgacgac
gacgaggaactcgcggcgtggaaggcgggcgaaaccggctaccccatcgtcgacgccggg
atgcgacagctccgcgaggaggcgtacatgcacaaccgcgtccggatgatcgtcgcgtcg
ttcctcacgaaggacctgctgtgcgactggcgacacggctacgcgcacttccgcgagcac
ctcgcggaccacgacaccgcaaacgacaacggcggctggcagtgggccgcctcgacgggg
accgacgcccagccgtacttccgcatcttcaacccgatgacgcagggcgagcgttacgac
cccgacggcgagtacatcaagcggtacgtccccgagctctcggacgtgacggccaacacc
atccacgagtggcacgaactgaccgacctcgaacgcgagcggctcgcgcccgactacccg
gagcccatcgtggaccacgccgaccgccgcgagcgcgcgatttcgatgttcgaggccgcc
cgcggcgacgactga
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