Haloferax volcanii SVX82: SVXHx_1746
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Entry
SVXHx_1746 CDS
T08885
Symbol
fen1
Name
(GenBank) 5'-3' exonuclease
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
hln
Haloferax volcanii SVX82
Pathway
hln03030
DNA replication
hln03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SVXHx_1746 (fen1)
03410 Base excision repair
SVXHx_1746 (fen1)
03450 Non-homologous end-joining
SVXHx_1746 (fen1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hln03032
]
SVXHx_1746 (fen1)
03400 DNA repair and recombination proteins [BR:
hln03400
]
SVXHx_1746 (fen1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hln04147
]
SVXHx_1746 (fen1)
DNA replication proteins [BR:
hln03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
SVXHx_1746 (fen1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
SVXHx_1746 (fen1)
DNA repair and recombination proteins [BR:
hln03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
SVXHx_1746 (fen1)
Exosome [BR:
hln04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SVXHx_1746 (fen1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
5_3_exonuc_N
Motif
Other DBs
NCBI-ProteinID:
WEL26048
LinkDB
All DBs
Position
1641622..1642602
Genome browser
AA seq
326 aa
AA seq
DB search
MGNADLRTLAALSEVSFDEVSGSVVAVDAHNWLYRYLTTTVKWTSSETYTTSEGEEVANL
VGIVQGLPKFFEHDLTPVFVFDGGVTEMKDDEVAKRREQREKAEERLEAAREAGDAAEAA
RMEARTQRLTETIQDTSRELLSLFDVPVVEAPAEGEAQASYMARTGDADYVGSEDYDTLL
FGAPYTLRQLTSKGDPELMDLDATLDKHDITHEQLVDIAMLCGTDFNEGITGIGPKTAVK
LVTEHGDLWSVLEARGDTIPNADRVREFFLDPPVTDDYDYDTDIDPDVAAAREFVTETWE
VDPEEVRRGFERIEESVTQTGLDRWT
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacgcagacctgcggacgctcgccgcgctctccgaggtgtcgttcgacgaggtg
tccgggagcgtcgtcgccgtcgacgcccacaactggctgtaccgctatctcacgacgacg
gtcaagtggacgagttcggagacgtacacgacgagcgagggcgaggaggtcgccaacctc
gtcggcatcgtccagggactccccaagttcttcgaacacgacctgacgcccgtcttcgtc
ttcgacggcggcgtcaccgagatgaaagacgacgaggtggccaagcgccgcgagcagcgc
gagaaggccgaagaacgcctcgaagcggcgcgtgaggcgggcgacgcggccgaggccgcc
cggatggaagcccggacccagcggctcaccgagacgattcaggacaccagccgcgaactc
ctctcgcttttcgacgtgccggtggtcgaagcgcccgccgagggcgaggcgcaggcgtcc
tacatggcccgcacgggcgatgccgactacgtgggcagcgaggactacgacaccctcttg
ttcggcgcaccctacacgctccgacagctcacgagcaagggcgaccccgagctgatggac
ctcgacgcgacgctcgacaaacacgacatcacccacgagcaactcgtcgacatcgccatg
ctctgcgggaccgacttcaacgagggcatcacgggaatcggcccgaagacggccgtgaaa
ctcgtcacggaacacggcgacctctggtcggtcctcgaagcccgcggcgacaccatcccc
aacgccgaccgggtgcgcgagttcttcttggacccgccggtcaccgacgactacgactac
gacaccgacatcgaccccgacgtggccgccgcccgcgagttcgtcaccgagacgtgggag
gtcgaccccgaggaggtccgccgcggcttcgagcgcatcgaggaatcggtcacgcagacc
ggtctcgaccgctggacgtag
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integrated database retrieval system