Haloferax volcanii SVX82: SVXHx_1811
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Entry
SVXHx_1811 CDS
T08885
Symbol
udg3
Name
(GenBank) Uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hln
Haloferax volcanii SVX82
Pathway
hln03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SVXHx_1811 (udg3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hln03400
]
SVXHx_1811 (udg3)
Enzymes [BR:
hln01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SVXHx_1811 (udg3)
DNA repair and recombination proteins [BR:
hln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SVXHx_1811 (udg3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
GerT_N
Motif
Other DBs
NCBI-ProteinID:
WEL26108
LinkDB
All DBs
Position
complement(1704328..1704924)
Genome browser
AA seq
198 aa
AA seq
DB search
MDTDCTNCSALCETREQVVHGYGDVGAEFLFVGEAPTAAAERTGVPFTGDEAGRRVQRIL
GDLGFVRSEPDADEPDVQNVFFTYLTRCRHPDRGPTDDEVATCEPYLNAEIRMINPHIIV
PVGQAALEALAFDYTTRAADSFDVDAEHATTIRGRGFELVPMKEPERLTDADAEAFVEHV
RESVFGRDYRQTKGRQSR
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgactgcacgaactgctcggcgctctgcgagacgcgcgagcaggtcgtccac
ggctacggcgacgtgggcgcggagttcctgttcgtcggcgaggctccgaccgcggccgcc
gagcggaccggcgtgccctttaccggcgacgaggccggacggcgcgtccagcgcatcctc
ggcgacctcggcttcgtccggtccgagccggacgccgacgagccggacgtgcagaacgtc
tttttcacgtatctcacgcgctgtcgacaccccgaccgcgggccgactgacgacgaagtg
gcgacctgcgagccgtacctgaacgcggagattcggatgataaacccgcacatcatcgtt
cccgtcggacaggccgcgctggaggcgctcgcgttcgattacaccacgcgcgcggccgac
agcttcgacgtcgacgcggagcacgcgacgaccatccgcggccgcggcttcgaactcgtc
ccgatgaaggagccggagcgcctgaccgacgccgacgccgaggcgttcgtcgaacacgtc
cgcgagtccgtgttcggccgggactaccggcagacgaagggacggcagagtcgctga
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