Haloferax volcanii SVX82: SVXHx_1913
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Entry
SVXHx_1913 CDS
T08885
Symbol
trmB
Name
(GenBank) Sugar-specific transcriptional regulator TrmB
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
hln
Haloferax volcanii SVX82
Brite
KEGG Orthology (KO) [BR:
hln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hln03000
]
SVXHx_1913 (trmB)
Transcription factors [BR:
hln03000
]
Prokaryotic type
Helix-turn-helix
Other families
SVXHx_1913 (trmB)
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Gene cluster
GFIT
Motif
Pfam:
Regulator_TrmB
TrmB
MarR_2
HTH_20
HTH_IclR
HTH_24
HTH_CodY
HTH_Cmi2_C
HTH_5
Rrf2
HTH_9
GCR1_C
HTH_37
MarR
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
WEL26207
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Position
complement(1792163..1793224)
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AA seq
353 aa
AA seq
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MADELRLTMERVGERFNLGEYEIDAYLAVLEHGQLTASEIADRTSIPQPRVYDTVRSLSD
RGLVELRESRPMKIVAVDPDDAFANVKTSLEELIEELEARYTAPARDTEAVSLVKSRSTI
LRYIEEIIEAAEYELVLSLTPDLLRRFRDDLAAAIDSGVSIDLLVTPASRAPDPEEFNYL
DVATIARARRGITSPVLAVADGEYSIYATQDALRDDRDRYGVIFNRSALGFLVSGFFGTV
LWSTAETIVANGKRRPFPRRYASIRRAVKDIREIDGDFYASVSGRDIETGDPIVVEGRVI
ETAFEDTEEVASLHIETEEGVVEVGGLVAALEDVEGQEILLGRDEVPNRDEIV
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgaactgcggctcaccatggagcgagtcggtgagcgcttcaacctcggcgag
tacgagatagacgcgtatctggccgttctcgaacacggacagttgacggcgagcgaaatc
gcggaccgaaccagcatcccccagccgcgggtgtacgacacggtccgaagcctgtcggac
cgcggcctcgtcgaactccgcgagtcgcgcccgatgaaaatcgtcgccgtcgaccccgac
gacgccttcgcgaacgtcaagacctcgctggaggaactcatcgaggaactggaggcgcgc
tacaccgcccccgcccgcgacaccgaggccgtctcgctcgtcaagtcgcggtcgaccatc
ctccgctacatcgaggagattatcgaggccgcggagtacgaactcgtgctctcgttgacg
cccgacctgctccgtcgcttccgcgacgacctcgcggcggccatcgacagcggcgtcagc
atcgacctgctcgtgacgcccgcctcccgcgcgcccgaccccgaggagttcaactacctc
gacgtggcgaccatcgcccgcgcccgccgcggcatcacctcgcccgtcctcgcggtcgct
gacggcgagtactccatctacgcgacccaggacgccctccgcgacgaccgcgaccgctac
ggcgtcatcttcaaccgctccgcgctcggcttcctcgtcagcgggttcttcgggaccgtc
ctctggagcaccgccgagaccatcgtcgccaacggcaagcgccggccgttcccgcggcgc
tacgcctctatccgccgggccgtcaaggacatccgcgagatagacggcgacttctacgcc
tccgtctccggccgcgacatcgagacgggcgaccccatcgtggtcgaaggccgcgtcatc
gagacggcgttcgaggacacggaggaggtcgcgtcgctccacatcgagaccgaggagggc
gtcgtcgaggtcggcgggctggtcgccgcgctcgaagacgtggaaggacaggagattctg
ctcggccgcgacgaggttccgaaccgcgacgaaatcgtctga
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