Haloferax volcanii SVX82: SVXHx_1992
Help
Entry
SVXHx_1992 CDS
T08885
Symbol
miab
Name
(GenBank) tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransfera se
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
hln
Haloferax volcanii SVX82
Brite
KEGG Orthology (KO) [BR:
hln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hln03016
]
SVXHx_1992 (miab)
Enzymes [BR:
hln01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
SVXHx_1992 (miab)
Transfer RNA biogenesis [BR:
hln03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
SVXHx_1992 (miab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
SPL
Motif
Other DBs
NCBI-ProteinID:
WEL26286
LinkDB
All DBs
Position
1871586..1872875
Genome browser
AA seq
429 aa
AA seq
DB search
MARYHIETYGCTSNRGESRAIESALRDAGHYRVDGPEEADVAIMNTCTVVEKTERNMLRR
AKELAAETADLIITGCMALAQDNDFREEGIDAQILHWDDVPTAVTNGECPTPGPGVEPVL
DGVVGILPIARGCMSNCSYCITKFATGRVDSPSVDENVEKARALVHAGAKELRITGQDTG
VYGWDKGDRKLPELLDRICTEIDGEFRVRVGMANPGGVHGIRDELAAVFARHDKLYNFIH
APVQSGSDEVLEHMRRQHRVDKFREIVETFDRELDYWTLSTDFIVGYPTETDADHERSME
LLREVRPEKVNVTRFSKRPGTDAADLKGLGGTLKKERSKEMSEAKMDIVAAAYDEMVGTE
RDVLVVEEGTGDSVKCRDEAYRQIIVQNATEHGLEPGDFARVTVTAHQTVYAFAEPVEAQ
PEPREPTAA
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggcccgataccacatcgagacatacggctgcacctcgaaccgcggcgagagccgcgcc
atcgagagcgcgctccgcgacgccggccactaccgcgtcgacgggcccgaggaggccgat
gtcgccatcatgaacacctgtacggtcgtggagaagacggagcggaacatgctccgtcgg
gccaaagagctggcggcggagacggcggacctcatcatcacgggctgtatggcgctcgcg
caggacaacgacttccgcgaggagggcatcgacgcccagattctccactgggacgacgtg
ccgaccgccgtcaccaacggcgagtgtccgacccccggccccggcgtcgaacccgtcttg
gacggcgtcgtcggcatcctgcccatcgcccgcggctgtatgtcgaactgctcgtactgc
atcacgaagttcgccaccggccgcgtcgattcgccctcggtcgacgagaacgtcgagaag
gcgcgggcgctcgtccacgccggcgcgaaggaactccgcatcacggggcaggacaccggc
gtctacggctgggacaagggtgaccgaaagctccccgagctactggaccgcatctgcacc
gaaatcgacggcgagttccgcgtccgcgtcggcatggccaaccccggcggcgtccacggc
atccgcgacgaactcgccgcggtgttcgcccgacacgacaagctctacaacttcatccac
gcgcccgtgcagtcgggctccgacgaggtgctcgaacacatgcgccgccagcaccgcgtc
gacaagttcagagaaatcgtcgagacgttcgaccgcgaactcgactactggacgctctcg
accgacttcatcgtcggctacccgaccgagaccgacgcggaccacgagcggtcgatggag
ctgctccgcgaggttcgccccgagaaggtcaacgtcacgcgcttctcgaagcgccccggc
accgacgccgccgacctgaagggcctcggcgggacgctcaaaaaggagcgttccaaggag
atgtccgaggcgaagatggacatcgtcgccgccgcgtacgacgagatggtcggcacggag
cgcgacgtgctcgtcgtcgaggagggtaccggcgactccgtgaaatgccgcgacgaggcc
taccgccagataatcgtccagaacgccaccgaacacggcctcgaacccggcgacttcgcc
cgcgtgacggtgaccgcccaccagaccgtctacgccttcgccgaaccggtcgaggcacag
cccgaaccgcgggagcccaccgccgcctga
DBGET
integrated database retrieval system
