Haloferax volcanii SVX82: SVXHx_2109
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Entry
SVXHx_2109 CDS
T08885
Symbol
truB
Name
(GenBank) Pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hln
Haloferax volcanii SVX82
Brite
KEGG Orthology (KO) [BR:
hln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hln03016
]
SVXHx_2109 (truB)
Enzymes [BR:
hln01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SVXHx_2109 (truB)
Transfer RNA biogenesis [BR:
hln03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SVXHx_2109 (truB)
Prokaryotic type
SVXHx_2109 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
PUA
DKCLD
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
WEL26400
LinkDB
All DBs
Position
1968629..1969498
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AA seq
289 aa
AA seq
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MLRDPPEHRSVDDLLSFGVVNLDKPPGPSAHQVTGWVRDMADVDRAAHSGTLDPKVTGCL
PTLLGDATRMAQVFLEGSKEYVSVLELHGPAPADIDSTVAEFESKLYQKPPRKSAVSRRL
RVREVYDLDLLEVKDRQALLRIRCESGTYIRKLCHDLGLALGTGGHMGHLRRTATDPFDD
ADLATLHDLTDALAFAEEGDESWLRDVVSPAERALSHLPSVTIANSAAREVANGAPVYAP
GVFDVDADAARGDLVACFTDDGSAVCLGELVGDADADSGEVVSLEAVLV
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgctccgagacccgcccgaacaccgcagcgtcgacgacctgctctcgttcggcgtcgtc
aacctcgacaagccgccggggccgtcggcccaccaagtcaccggctgggtccgcgacatg
gccgacgtcgaccgcgccgcccactcggggacgctcgacccgaaggtgaccggctgtctc
cccacgctcctcggcgacgcgacccgcatggcgcaggtgttcctcgaaggctcgaaggag
tacgtctccgtgctcgaactccacggccccgcgccggccgacatcgactcgaccgtcgcc
gagttcgaatcgaagctctaccagaagcccccgcggaagtccgccgtctcgcgccgcctc
cgcgtccgcgaggtgtacgacctcgacctcctcgaagtgaaagacagacaggcgctgttg
cgcatccggtgcgagtcgggcacgtacatccggaaactgtgtcacgacctcggactcgcg
ctcggcaccggcggccacatgggtcacctccgccggaccgcgaccgaccccttcgacgac
gcggacctcgccacgctccacgacctcacggacgccctcgcgttcgccgaggagggcgac
gagtcgtggctccgcgacgtggtctcgcccgccgagcgggcgctgtcgcacctcccgtcc
gtgaccatcgccaacagcgcggcccgcgaggtcgccaacggcgcgcccgtctacgccccc
ggcgtcttcgacgtcgacgccgacgccgcccgcggcgacctcgtcgcctgtttcaccgac
gacggttcggccgtctgtctgggcgaactcgtcggcgacgccgacgccgactccggcgag
gtcgtctcgctggaagccgtgttagtctga
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