Haloferax volcanii SVX82: SVXHx_2408
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Entry
SVXHx_2408 CDS
T08885
Name
(GenBank) Cell surface protein containing PGF C-terminal sorting motif
Organism
hln
Haloferax volcanii SVX82
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARDB
Big_3_3
Big_13
PGF-CTERM
HYDIN_VesB_CFA65-like_Ig
FlgD_ig
ChitinaseA_N
Cep192_D4
DUF4198
HupF_HypC
SoxY
Motif
Other DBs
NCBI-ProteinID:
WEL26692
LinkDB
All DBs
Position
complement(2250511..2257290)
Genome browser
AA seq
2259 aa
AA seq
DB search
MSRYRRLSRQGLSLALTLIVVLSVIAGPVSASAGTATGEAQLGGPPANQLDTVDDDQLTR
ASENISVWDGAFLSLRPDDTDSRLDSAAAYQVQSTNTYVRVDGRERSLEKNPMYVYNVGQ
EVPFTFSGSSAGAPRAIEGQDVQLVAAKLDKGATIPRSVPGIAQTLTSDDDVSSSVVGSA
QGTSDDNSFAFTPDESGMWMFAVVTVDDGTGFSDANGDGNLETDGNVTFVGVDALPVQQG
SSSVSAPSLAGNGQNVTVTVDASSLDATEVSHTVAIFNESDLSNYDQTINATDRSSISLE
TEIARVNGTSRMPSNANIMGVTPGSRSFVGSETAVSIFDQLNDSTSRFDDVTVVSPGATV
YGSAVTEVAGNQTTVEVPIADDATPGDYVVMHVATNQSGTESVTNRAPLQVAQSVQLNLT
ANTTTPVAGEDVEFAVTREDTGAAVENAEVTVGGTTVQTNANGVAVVTVPTAGEYNATVS
KNATNGEAFAGDALALDVFEPATFEYSNLTIEPKQVVPGTDVVANATVENVGEVNGSYEA
ALTVDGEPQPSSDTGELQPNESTEVSFTTSFEDPGTYNVSIDELSTDDAELVSRTVRVIA
PANSTVTDVTVEPTSVNTTERYTTSATVENTGGRSDLVRLTYTTTDDSGTEVSNTTRTVV
VGADSTVTRNVTTLAPTALGADDVGNFTVAVNGVEADSTLTVTRRDRLPPTVRLPEPAQG
AVPFGTPITLNVSDESDIRRATYNFGNGSQPLSLDANGSATVPTGDLDEGETTLTVNATD
TAGNTITRTFSFDFVSSPRVTSVEPTDVVGPSSTISASFADDRNGDAESGINASATTLVV
NGTAVDLSGATTNDNSTLEINVSELGVSLDEGPTTARLTVVDEAGHATSRLFEFEYDETA
PTASLTLDPDYDEDREDVSANNPVDITLDSADDNLESAAFVVRDSDDEAVYTRDVTSLAS
STGEFEIEWDGTSDDSSLVDSCSYNLTLVSTDAGGNTGVANATVCVDNDEPTYDVSAVDG
TTDPVYTNGSVDVAYSTSESVTVEYAFESDSGVTATFERTPDNGTGNHTLDVASALPDGN
YTMTATATDLGNNQVTVERADPVVVDTTDPGLTATLNTTESGTLSVSVASTEPLAGTPDA
ELTDPNSNVESLNLTEQDSTTWTAELDTTESGEYALDVTGTDRAGNTASDSSTATVTSNN
FSEQSSVLLVSASGDTFIRINASDDADLPAGQTVITLTDTNVPPNALSQGTAATKYLEAN
AGLTEDQIESVTYGFNEDLDTSGNGFNIVYIERGGTQVLPTTLQTDPFVLSGNYYTATRT
GLSTYGAVENDTEAPTISYDDPAEGAEFSEVNNTVSVNATLSDNVEVNTSSVSVTLDSDG
PVSNVDVTDNATVTNESVNYTASGLSPADYTVTIEASDTNLTANTATEQVNFTVQDDREP
PTITALGPTNGTTFPFGTDTVELNATYEEASDAVNDTGVDAENVTVLYDGQDISASAAPD
ATGFNTTVSVDGNETHNLTVRVLDNAGNSVEDTTNFSIAADDAEPTVEISSPVEDEELSN
TTSSVNVTASVDDAESGVNLSSVTVTFDGTDVTSEATLDDLSNIRLNETGLEPGTSHTVS
VSAADESGNENASTVNFTVAPDLTAPNVTRVSSQNATFESDANVSVEVNYSDPESGIDAS
AVTLLLDGEDVTDDATVFSNPGATLDLNSSEIDSGEHLLSVRVTNNNGDTTTNDTTFSVN
QGPDIAVTAADLNATSVQTGDQVEVTAQVENFGDETGSLDVGVTGTSQAGTTDFGATKSV
TLDTGENQSVSLVIEPTSAGTYSIAVNETTTENALDVSSPTADIQLLGDSSASPSTLLED
EETTVTVKLGNLGGASGNISGDVTRNGTTVGNISTSLASGAQRTFTFTDTPPGTGDYVYA
FGGETIETVSVSARLPAFSIDAGASSISQSTVDTEETFTVSVRVNNTGTAEGTYTKALTA
DGTTLATESVTVGPGSSGTLTYTVSIDDAGTYDLQVDNVTVGSITVEEPNVGGGGGGAGG
SSLPHDDTTDSDRLFSARGFDAQFDGGQGVSAVSITFSEQTTGEVVVSERSGVPGSVGQP
DGTAVSYVRIDVPDSARDRASTLRFTVKQSRLDELGIESSDLVVRRFNEDAGSWEDLETS
VVDSGNGAVVLEADTPGFSYFAVTSRQAVTTTTPDDDDGTTTTTTPDDGTDTTTGTAGFD
DETSTAASGTSDSPVPGFGAALAVVALLAAALLAVRRND
NT seq
6780 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgctaccgcaggctctcccgacaagggttgagtcttgcactcactctcatcgtg
gtactctcggttatcgcagggccagtctctgcgagcgccgggaccgccacaggtgaggca
caactgggtggaccgcccgctaaccaactcgacacggtcgacgacgaccaactgacccgg
gcgtcggagaacattagcgtctgggacggcgcgttcctgtcgctccggcctgacgacacc
gactcgcggctcgactcggccgcggcgtatcaggtccagtcgaccaacacgtacgtgcgg
gtagacgggagggagcggtccctcgaaaagaatccgatgtacgtgtacaacgtcggacag
gaggtcccgttcacgttctccggttcgagcgccggtgcgccccgagccatcgagggccag
gacgtccaactcgtcgcggcaaagctcgataagggcgcgacgattccccggagcgtcccc
ggcatcgcccagacgctcacgagcgacgacgacgtgagttcctcggtcgtcggctcggcg
cagggcacgtcggacgacaactcgttcgcgttcacgcccgacgagtcaggcatgtggatg
ttcgcggtcgtcaccgtcgacgacggcaccggcttttcggacgccaacggcgacgggaac
ctcgaaaccgacggcaacgtcacgttcgtcggcgtcgacgccctgcccgttcagcagggg
tcgtcgtcggtgagcgcgccgtcgctcgcgggcaacggccagaacgtgacggttacggtg
gacgcctcgtcgctcgacgcgaccgaggtcagccacaccgtcgcaatcttcaacgagtcc
gacctctcgaactacgaccagaccatcaacgcgaccgaccggtcgagcatctcgctcgaa
accgaaatcgcgcgggtcaacgggaccagtcggatgccgtcgaacgcgaacatcatgggc
gtcacgcccggttcgcggtcgttcgtcggcagcgagacggccgtttcgattttcgaccaa
ctcaacgacagcacgtcccggttcgacgacgtgaccgtcgtctccccgggcgcgaccgtc
tacggttcggccgtcaccgaggtcgcggggaaccagacgaccgtcgaggtccccatcgcc
gacgacgccacgcccggtgactacgtcgtgatgcacgtcgcgacgaaccagtcgggcacc
gagtcggtgacgaaccgcgcgccgctgcaagtcgcccagagcgtccaactgaacctgacg
gcgaacacgaccacgcccgtcgcgggtgaggacgtggagttcgccgtcacgcgcgaagac
accggcgcggccgtcgagaacgccgaggtcaccgtcggcggaacgaccgtccagacgaac
gccaacggcgtcgcggtcgtcaccgtcccgacggcgggcgagtacaacgccaccgtctcg
aagaacgcgacgaacggcgaggcgttcgccggcgacgcgctcgcgctcgacgtgttcgag
ccggcgaccttcgagtacagcaacctcaccatcgaaccgaaacaggtcgttcccggaacc
gacgtagtcgcgaacgcgaccgtcgagaacgtcggtgaagtcaacgggagctacgaggcg
gcgctcaccgtcgacggcgagccgcagccgtcctccgacaccggcgagctccagcccaac
gagtcgaccgaggtgagcttcaccacctcgttcgaggaccccggcacctacaacgtctcc
atcgacgagctctcgaccgacgacgccgaactcgtctcgcggactgtccgcgtcatcgcg
ccggcgaactcgaccgtgaccgacgtcaccgtcgagccgacgagcgtcaacacgaccgag
cgctacaccacttcggcgaccgtcgagaacaccggcggtcgctccgacctggtccggctc
acgtacacgacgaccgacgactcgggcacggaggtctccaacaccacccgaaccgtcgtc
gtgggcgctgattccacggtcacgagaaacgtgaccacgctcgcgccgaccgcgctcggt
gccgacgacgtcggaaacttcaccgtcgccgtcaacggcgtcgaagcggattcgacgctg
acggtcacgcggcgcgaccggcttccgccgaccgtccggcttccggaacccgcacagggc
gcggttcccttcggcacgcccatcacgctcaacgtgagcgacgagtcggacatcaggcgc
gcgacgtacaacttcggtaacggctcgcagccgctctcgctcgacgccaacgggagtgcg
accgtcccgaccggcgacctcgacgagggagagacgacgctgacggtcaacgcgaccgac
acggccgggaacacgattacccggacgttcagcttcgacttcgtctcctcgccgcgcgtc
acgagcgtcgaaccgaccgacgtcgtcgggccgtcgagcactatctcggcgtccttcgcg
gacgaccgcaacggcgacgcggagtcaggcatcaacgccagcgcgacgacgctcgtggtc
aacggcacggccgtcgacctctcgggcgcgacgacgaacgacaactcgacgctcgaaatc
aacgtctccgaactcggcgtctcgctcgacgaggggccgacgaccgcgagactgaccgtc
gtcgacgaggccggccacgccacctcgcggctgttcgagttcgagtacgacgagaccgcg
ccgaccgcgagtctcacgctcgaccccgactacgacgaggaccgcgaggacgtgagcgcg
aacaaccccgtcgacatcacgctcgacagcgccgacgacaacctcgaatccgcggcgttc
gtcgtccgtgactcggacgacgaggcggtgtacacgcgcgacgtgacctccctcgccagt
tcgaccggcgagttcgaaatcgagtgggacggcacgagcgacgacagcagtctcgtcgac
agctgttcctacaacctcacgctcgtgagcacggacgccggcggtaacaccggcgtcgcc
aacgccacggtctgcgtggacaacgatgagccgacctacgacgtgtcggccgtcgacgga
acgacggaccccgtctacacgaacggcagcgtcgatgtcgcgtacagcacctcggagagc
gtcaccgtcgaatacgcgttcgagtccgactcgggcgtgacggcgacgttcgaacggacg
cccgacaacgggacgggcaaccacacgctcgacgtggcgtcggcgctccccgacgggaac
tacacgatgacggcgaccgccaccgacctcggtaacaaccaggtcaccgtggaacgggcc
gaccccgtcgtggtcgacacgaccgaccccggactcaccgcgacgctcaacacgaccgag
tccggcaccctctcggtcagcgtcgccagcacggaaccgctcgccggcacccccgacgcg
gaactcaccgacccgaacagtaacgtcgagtcgctgaacctcacggaacaggactcgacg
acgtggaccgccgaactcgacacgaccgagtccggcgagtacgcgctcgacgtgacgggg
accgaccgcgccggcaacacggcgagcgactccagtaccgcgaccgtcacgagcaacaac
ttctcggagcagtcgtcggtgctgctcgtgagcgcgagcggcgacacgttcatccgcatt
aacgccagcgacgacgccgacctgcccgctgggcagaccgtcatcacgctgaccgacacg
aacgtcccgccgaacgcgctctcgcagggcacggcggcgacgaagtacctcgaagccaac
gccggactcaccgaggaccaaatcgagagcgtcacctacggcttcaacgaagacctcgac
acctccggaaacggcttcaacatcgtctacatcgagcgcggcggcacgcaggtgctgccg
acgacgctccagaccgacccgttcgtcctgtccggtaactactacaccgcgacccgaacc
ggtctgtcgacctacggcgcggtcgaaaacgacacggaagcgccgaccatcagctacgac
gacccggccgagggcgccgagttctccgaggtcaacaacacggtctcggtgaacgcgacg
ctctccgacaacgtggaggtcaacacctcctcggtgtcggtgacgctcgacagcgacgga
ccggtcagtaacgtggacgtgaccgacaacgcgacggtcacgaacgagtcggtcaactac
actgcgtccggtctctcgccggcggactacaccgtcaccatcgaggcgtccgacacgaac
ctgaccgccaacacggcgaccgaacaggtcaacttcaccgtgcaggacgaccgcgaaccg
ccgacgatcaccgcgctcggcccgaccaacggcacgaccttcccgttcggcaccgacacg
gtggaactcaacgcgacctacgaggaagcgagtgacgcggtgaacgacaccggcgtcgac
gcggagaacgtcaccgtcctgtacgacggacaggacatctcggcctcggccgcgcccgac
gcgaccgggttcaacacgaccgtctccgtagacggaaacgagacgcacaacctcaccgtt
cgcgtgctcgacaacgccggtaacagcgtcgaggacacgacgaacttcagcatcgccgct
gacgacgccgagccgacggtcgagatttcgagccccgtcgaggacgaggaactctcgaac
acgacgagttcggtcaacgtgacagcgagcgtcgacgacgccgaaagcggcgtcaacctc
agctccgtgaccgtcaccttcgacgggaccgacgtcacgagcgaggcgaccctcgacgac
ctctcgaacatccggctcaacgagaccggtctcgaaccgggcaccagccacacggtgtcc
gtctcggcggccgacgagagcgggaacgagaacgcctcgacggtgaacttcaccgtcgcg
cccgacctgacggcaccgaacgtcacgcgggtcagttcccagaacgccaccttcgagagc
gacgctaacgtctcggtcgaagtgaactactccgaccccgagagcggcatcgacgcctcc
gcggtgacgctgctgctcgacggcgaggacgtgaccgacgacgcgacggtgttctcgaac
cccggcgcgacgctcgacctcaactcgtccgaaatcgactcgggcgaacacctactcagc
gtgcgcgtcaccaacaacaacggtgacacgaccacgaacgacaccacgttctcggtcaat
cagggtccggacatcgccgtgaccgccgcggacctcaacgcgaccagcgtgcagaccggc
gaccaggtcgaggtgaccgcgcaggtcgagaacttcggtgacgagaccgggtcgctcgac
gtcggcgtcaccggcaccagccaggcgggcaccaccgacttcggcgccacgaagtccgtg
accctcgacactggtgagaaccagtccgtgagcctcgtcatcgagccgacgagcgcgggc
acctactccatcgcggtcaacgaaacgaccacggagaacgcgctcgacgtgagttcgccg
acggccgacatccaactgctcggcgactcgtcggccagtccgtcgacgctcctcgaagac
gaggagacgaccgtcacggtcaaactcggtaacctcggcggcgcgagcggcaacatctcc
ggcgacgtgacccggaacgggacgacggtcgggaacatctcgacctcgctcgcgtccggc
gcacagcggacgttcaccttcaccgacacgccgccgggaaccggcgactacgtctacgcg
ttcggcggcgagaccatcgagacggtcagcgtctcggcgcgtctcccggcgttcagcatc
gacgcgggcgcgagttccatctcgcagtcgaccgtggacaccgaagagacgttcacggtc
tcggtgcgcgtgaacaacaccggaaccgcggaggggacgtacaccaaagcgctcacggct
gacggcacgacgctggccacggagagcgtcaccgtcggccccggttcctccggcacgctg
acgtacaccgtctccatcgacgacgccggcacgtacgacctccaggtcgacaacgtcacg
gtcggcagcatcaccgtcgaggaaccgaacgtcggtggcggcggcggcggtgccggcggg
agcagcctcccccacgacgacacgaccgacagcgaccggctgttctcggcacgcggcttc
gacgcccagttcgacggcggacagggcgtctccgcggtgagcatcacgttcagcgagcag
acgaccggcgaggtcgtcgtcagcgaacggtcgggagtccccggcagcgtgggacagccc
gatggcacggccgtcagctacgtgcggattgacgtgcccgacagcgcgcgcgaccgcgcg
tcgaccctccggttcaccgtcaaacagagccggctcgacgaactcggcatcgaatcgtcc
gacctcgtggtccggcggttcaacgaggacgccggttcgtgggaagacctcgaaaccagc
gtcgtcgacagcggtaacggcgcggtcgtcctcgaggccgacacgcccggcttctcgtac
ttcgccgtgacgtcgaggcaggccgtcacgacgacgacgccggacgacgacgacggcacg
acgacgacgacgacgccggacgacggcaccgacacgacgactggcactgccggcttcgac
gacgaaacgtcgacggcagcgagcggcacgagcgactcccccgttcccggattcggcgcg
gcgctcgccgtggtcgcgctcctcgcggccgcgctcctcgccgtccgtcggaacgactaa
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integrated database retrieval system
