Haloferax volcanii SVX82: SVXHx_2415
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Entry
SVXHx_2415 CDS
T08885
Symbol
thiC
Name
(GenBank) Phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
hln
Haloferax volcanii SVX82
Pathway
hln00730
Thiamine metabolism
hln01100
Metabolic pathways
hln01240
Biosynthesis of cofactors
Module
hln_M00896
Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
hln00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
SVXHx_2415 (thiC)
Enzymes [BR:
hln01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
SVXHx_2415 (thiC)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
Motif
Other DBs
NCBI-ProteinID:
WEL26699
LinkDB
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Position
complement(2264067..2265515)
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AA seq
482 aa
AA seq
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MASTQLQHARAGRVTPAMERVAERENRDPEFVRKQVAEGQAVVPANRNHDSLDPMVIGRE
FATKVNANIGNSETTSDLTGELEKLHTAVHYGADTVMDLSTGSNLDEIREANVAYSPVPI
GTVPIYEAVKRVDSPADISRDLLLEIIEKQAEQGVDYMTIHAGVLMEHLPLTDGRKTGIV
SRGGSILAQWMEEHGEQNPLFVAFEDICDVFAEHDVTFSLGDGLRPGCLADAGDDAQFAE
LDTLGELTRTAWDYGVQVMVEGPGHVPMDQIAENVERQQEVCDGAPFYVLGPLVTDVAPG
YDHITSAIGATEAGRAGAAMLCYVTPKEHLGLPDREDVREGLAAYRIAAHAADVATDLPG
ARDWDDALSEARYEFDWARQFDLALDPERARSYHDQTLPGDNYKEARFCSMCGVEFCSMR
IDQDAREADGEMETIESATDLDASPAADANLPPVGAHDTDRVPDEIEIGGVTFTPESAHG
DD
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacacaactccaacacgcccgagcgggacgcgtcaccccggcgatggaacgc
gtcgccgagcgcgagaaccgcgaccccgagttcgtcaggaaacaggtcgccgaggggcag
gcggtcgtccccgcgaaccggaatcacgactcgctcgacccgatggttatcggccgcgag
ttcgccaccaaggtcaacgcgaacatcggcaacagcgagacgacgagcgacctcacagga
gagttggaaaagctccacaccgcggtccactacggtgcggacacggtgatggacctctcg
acggggtcgaatctcgacgagattcgcgaggcgaacgtcgcgtactcgccggtccccatc
ggcaccgtccccatctacgaggcggtcaagcgcgtcgacagccccgcggacatctcccgc
gacctgctcctcgaaatcatcgagaaacaggccgaacagggcgtcgactacatgacgatt
cacgcgggcgtgctgatggaacacctcccgcttaccgacggccggaagacgggcatcgtc
tcccgcggcggctccattctcgcccagtggatggaagaacacggcgagcagaacccgctt
ttcgtcgcgttcgaggacatctgcgacgtcttcgccgagcacgacgtgacgttctcgctg
ggcgacggtctccgacccggctgtctggccgacgccggcgacgacgcgcagttcgccgaa
ctcgacacgctgggcgaactcacgcggaccgcgtgggactacggcgtgcaggtgatggtc
gaaggtcccggtcacgtcccgatggaccaaatcgccgagaacgtcgagcgccagcaggaa
gtctgcgacggcgcgccgttctacgtcctcgggccgctcgtgaccgacgtggcaccgggc
tacgaccacatcacgagcgccatcggcgcgaccgaggcgggccgcgccggcgcggcgatg
ctgtgttacgtcacgccgaaagaacacctcggtctccccgaccgcgaggacgtgcgcgag
gggctcgccgcctaccgaatcgccgcccacgcggccgacgtggcgaccgacctccccggc
gcgcgcgactgggacgacgcgctctcggaggcccgctacgagttcgactgggcgcggcag
ttcgacctcgcgctcgaccccgagcgggcgcggtcgtaccacgaccagacgctccccggc
gacaactacaaggaggcgcgcttctgctcgatgtgcggcgtcgagttctgctcgatgcgc
atcgaccaggacgcgcgcgaggccgacggcgagatggagacaatcgagtccgcgaccgac
ctcgacgcgtcgcccgcggccgacgcgaacctcccgccggtcggcgcgcacgacaccgac
cgcgtccccgacgaaatcgaaatcggcggcgtcacgttcacgcccgagtccgcccacggc
gacgactga
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