Haloferax volcanii SVX82: SVXHx_2560
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Entry
SVXHx_2560 CDS
T08885
Symbol
sua7-7
Name
(GenBank) Transcription initiation factor TFIIB, Brf1 subunit/Transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
hln
Haloferax volcanii SVX82
Pathway
hln03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hln00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SVXHx_2560 (sua7-7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hln03021
]
SVXHx_2560 (sua7-7)
Transcription machinery [BR:
hln03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
SVXHx_2560 (sua7-7)
Prokaryotic type
Archaeal type
TFB
SVXHx_2560 (sua7-7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
DUF1272
Motif
Other DBs
NCBI-ProteinID:
WEL26844
LinkDB
All DBs
Position
complement(2418445..2419374)
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AA seq
309 aa
AA seq
DB search
MALRDIYERTFDESCGKTIDATDCPECDGTLTTEGGETGCDECGLIVNQYYIDHTHGPRV
FDDDPEPMRRTGSRLTPARHDYGVSAEIGYKRDANGNRVSSKKQWQLHRLRREHRRARYG
SKAERNLAHALQEIARMSSALDLPRSVVEEASQVYRQAQHRDLIRGRSIEMMAAGSLYAA
CRCRGLQRRPGEIGSVARCTADQLRTGYRALKVDMEIEPQIVTARTYVPRLASDCRVTSE
VNARAYELADLADRERITNGRNPAGVAAACLYLAGNERGSAKTQAEFAAAADVTVSTLRA
RYYELRERA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcactgagagacatctacgagcgaacattcgacgaatcgtgcggaaaaactattgat
gcgactgactgtcccgagtgcgacggcacgctcacaacggagggtggcgaaacggggtgt
gacgagtgtggcctcatcgtcaaccagtactacatcgaccacacccacggcccgcgtgtg
ttcgatgacgacccagaaccgatgcggcggacaggaagtcggctcacacctgcccgacac
gactacggtgtgtctgcagaaatcggttacaagcgtgatgcgaacgggaatcgtgtttca
tcgaaaaaacagtggcaacttcaccgacttcgtcgtgaacaccgccgggcacgctacggg
tcgaaagcagagcgaaatcttgcacacgcccttcaggaaatcgcacggatgtcgagcgcg
ctcgacctcccacgaagtgtggtcgaagaagcaagtcaggtctaccgacaggcgcaacat
cgtgatctcatccgtgggcggtcgatcgaaatgatggccgcaggcagtctgtatgcggcg
tgtcgttgccgtgggcttcagcggcggccaggcgagattggctcggttgctcggtgtact
gctgaccagttgcgaactggctatcgcgcactcaaagtcgacatggaaatcgaaccacag
attgtgacggcacgaacgtacgtcccgcggcttgcgtcggactgccgtgtgacctcagaa
gtcaacgcacgtgcgtacgaactcgccgacctcgcagaccgtgaacggataacgaacgga
cgaaaccccgcgggcgtggccgcagcgtgtctgtacctcgctgggaacgaacgaggaagt
gcgaagacacaggcggagttcgcagcagcagccgacgtgacggtatcgacgcttcgggca
cggtactacgaactgcgagagcgggcctga
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