Haloferax volcanii SVX82: SVXHx_3147
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Entry
SVXHx_3147 CDS
T08885
Name
(GenBank) Signal transduction histidine kinase with PAS and REC domains
Organism
hln
Haloferax volcanii SVX82
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
PAS
PAS_9
GAF_2
PAS_8
PAS_3
HATPase_c
GAF
HisKA
Response_reg
GAF_3
Diguanyl_cycl_sensor
OKR_DC_1_N
PAS_10
YfiO
MCU
Motif
Other DBs
NCBI-ProteinID:
WEL27355
LinkDB
All DBs
Position
pSVX82-1:180888..184793
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AA seq
1301 aa
AA seq
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MLGTSDELDDPIRVLYVNSDPAFAELVQIKLQQTSTEIDCIPADGIDEALHHLATERIDC
IVTAYSLEDSDGIGLTESIRQQNDDIPILLFTGQGSEEIASKATRAGVSDYIPVRSERDN
FTLLAARIRTLTRAARKQTEAEQTKRRFRRTLERATDAIYAVDSDWRIEYMNEKMAERIG
RDSDALVGEAIWEEFPSIVGTELEDKYRTAMETGEPVSFEQHLEEPFNYWVEVRAFPDDD
GLTVFSREITTERERELKLERSDAILENIHDVVFVLDEQGDIEFANTAAKRLLAGDQSAQ
LSGQQLETVVGDRVSDSDITRVSQAVESTLDEIESVGGSTGLYDADLQLDVVAGTSERTF
DVRVAPFQSRKSKQVLVVARDVTEQSEVKRQLERERDALQDLQAVMAESDVSAESRLQNL
LEVGCQTLGLEIGIVSRIQDSDYTVEAVHAPEADIEAGDQFNLESTYCAEVVGTDSVCSF
VDAVSDGKETHPAYRDFELESYIGVPLVVDDTRYGTVNFSSPTTRVAPFGALERTFVELV
AQLVSTELSRGRDRDELERQGFLFDRVQDIADIGIWEFVPSSGELAWSDGVRQIHGVDED
YEPSLDDAIEFYHPDDRETITAAVDRAIEDGEPYDLDLRIVRPDGAVRDVRAWGEYVDDT
QRGDAVLRGVFQDITEREAERREHRELAEEYEALLETSGDAIFLLDVDTAGEDPSFEFAR
LSPGYESQTGITTEEVRGKTPRDVFGDQEGAELEANYTRCVDQGAPISYHEELDIGDGAQ
FWETSLAPVIVDDEIVRVVGIARNVTEQVERERELEATNQRLESLIEATPLTVMEIDTDG
TVIRWNDEAETMFGWSQDEVLGEFNPMVPDEQQEEFDSHRQRVLSGERIRAKEIRRETKD
GDELDLLLSVAPVTGPDGETTSILAVLEDITEQKRLEARLRSLQDTAQHLSGAESSEEIG
AIAVDAAAEILDLDITGIWEYDDRENVLAPITETSEARDLFGESPRFTPGDSLAWDVFES
GETQVYDDIQAEGQPHNPNTEIRSEILVPLGEYGLMSTGSVSTQVFSETDVDLFRILGAT
VEAALARASREAELRRQNERLDQFASVVAHDLRNPLSVAMGFLEIAEETGKAEHFEKVES
AHDRIERLIEDLLTLARGETRIEDAEEIDLESITTEAWGYVDTEEATLTVADGIPTVTGD
AGRLTQLFENLFRNAIEHGGADVTVTVGGLDGDDGFYVEDTGSGIPQEKQDDVFKHGVTS
SEGGTGFGLSIVADIAKAHGWTVSVTDGSNGGARFEFKRSK
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
gtgctcggtactagtgacgaactggacgatccaatccgcgtcctctacgtgaactccgat
cccgcgttcgcggagttggttcaaatcaaactccaacagacgagtaccgagatcgactgt
atacctgccgacggtatcgacgaagcactgcaccatcttgctacggaacgaatcgactgt
atcgtaacggcgtactcgctcgaagattccgacggtatcgggcttacggagtcgattcgc
cagcagaacgacgatatcccgatactcctctttactggacaagggagtgaagaaatcgcg
agcaaagcgactcgggccggcgtctcggactacatcccagtccggtcggaacgtgataac
ttcacactactcgcggcccgcattcgaacgctcacaagggctgctcgcaaacaaacggag
gccgagcagaccaaacggcgcttccgacgaacgctcgaacgcgcaactgacgcgatttac
gccgtcgatagcgactggcgcatcgagtatatgaacgagaaaatggccgaacgaatcggc
cgtgactcggacgcgctcgtcggagaagccatctgggaagagttcccgtcgatcgtcggg
acggaactcgaagacaagtatcgaacggcgatggagactggtgaaccagtatcgttcgaa
cagcatctggaagagccattcaactactgggtcgaagtgcgagcgtttccagatgacgac
gggctgaccgtcttttcacgtgaaattactaccgagcgagagcgggaactgaagctagag
cgcagtgatgcgattctggagaacatccacgacgtcgtgttcgtcctcgacgagcaaggt
gatatcgagttcgcgaatacggctgcaaagcggttgctcgccggagatcagtcggcccag
ctctcaggacaacagctcgaaacggtcgtcggtgaccgcgttagcgattccgatataacg
cgagtctcccaggcagtcgaatcgacgctcgacgagatcgagagcgttggtgggtccacc
gggttgtacgatgcagacctccaactcgacgtcgtggccgggaccagcgagcggacattc
gacgtccgggtagccccgttccagagtcgcaaaagtaagcaggttctcgttgtcgctcga
gacgtgaccgaacaaagcgaggtaaagcgtcaattggaacgagagcgggacgcactccag
gacctccaggcagtcatggcagaaagcgatgtctcggccgagtcgcgcctccagaatctc
ttggaagtcggttgccagacgctcgggctcgaaatcggcatcgtctcgcggattcaggac
agcgactacacggtcgaagcagttcacgcaccggaagccgatatcgaagctggcgatcag
ttcaatctcgaatcgacgtactgtgcggaagtcgtcggcacggattcggtctgttcgttc
gtcgacgccgttagcgacgggaaagagacgcatcctgcctaccgtgacttcgagttagag
tcgtacatcggcgtgccactcgtcgtcgatgacacgcgttacggaaccgtcaatttctcg
agtccgacgacacgagtcgcgccgttcggagcgctcgaacgaacgttcgtcgagctggtc
gcacagctcgtgagtaccgaactctcgcgtggtcgtgaccgtgacgaactcgaacgtcag
gggttcctcttcgaccgcgttcaggacatcgcagatatcggtatctgggaattcgtccca
tcgagcggcgaactcgcctggtctgacggggtccgccagatccacggtgtcgacgaggac
tacgagccctccctcgacgacgcgatcgagttctaccaccccgacgacagagagacgatt
accgcagcagtcgaccgagcaatcgaagacggggaaccgtacgacctcgacctccgaatc
gttcgacccgacggagcggtgcgtgacgtccgggcgtggggagaatacgtcgacgacaca
cagcgcggcgacgcagtacttcggggtgtttttcaggacatcacggagcgagaagcggaa
cgccgtgagcatcgagagctcgcggaggaatacgaggcgttgctcgaaacgtccggggac
gcgatattcttgcttgacgtcgataccgctggtgaggacccatcattcgagttcgcaaga
ctcagtcccggatacgagtcacagaccggaattacgaccgaggaagttcgcggcaagacc
ccacgagacgtgtttggcgaccaggagggtgctgaactcgaggccaattacactcgctgc
gtcgatcagggggccccaatctcgtatcacgaagaactcgacatcggtgacggtgcgcag
ttctgggagaccagcctcgcaccagtaatcgtcgacgacgagattgttcgagtcgtgggt
atcgctcgaaacgttaccgagcaagtcgaacgagagcgtgaactcgaagcgacgaaccag
cgactggaatcgctcatcgaggccacgccactcacagttatggaaatcgacacggatggg
accgtcatccgctggaacgacgaggctgaaaccatgttcggctggtcgcaggacgaagtg
cttggcgagttcaatccgatggtcccggacgagcagcaggaagagtttgactcacaccgg
cagcgcgtcctgagcggcgagcgaatccgagcaaaggagatacggcgagagacgaaagac
ggagacgaactggacctgctcttgtcggtcgcgccggttacaggccccgacggagagact
acgagcatcctcgccgtcttggaggacataaccgaacagaaacggttggaagctcgcctc
cgctcgcttcaggacaccgcacagcatctgagcggcgctgaatcaagcgaggagatcgga
gcgattgccgtcgatgccgcggccgagatactcgacctcgatatcaccggaatttgggag
tacgacgaccgagagaacgtgctcgccccaattacggaaacgtccgaagcacgagacctg
tttggcgagtctccccggttcactcctggagacagtctcgcttgggacgtgtttgagtcc
ggagaaacccaggtatatgatgatatccaagctgaggggcaaccccacaacccgaacaca
gagatacggagtgagattctcgtcccactgggtgagtatgggctcatgtcgacggggtca
gtttccacgcaggtcttttctgagacggacgtcgacctgttccggattctcggtgcgact
gtcgaggcagcactcgcacgagcgagcagggaagcggaactacgccgacagaacgagcga
ctcgaccagttcgcgagcgtcgttgcccacgaccttcgaaacccgctctctgtcgcaatg
gggttcctcgaaatcgcggaggagaccgggaaggcggagcactttgaaaaagtagaatcc
gcgcacgaccgaattgaacgactcatcgaggacctcctgacgctggcacgtggggagacg
aggatcgaggatgcagaagagatcgacctcgagagtattacgacggaagcgtggggatac
gtcgacacggaggaggcaacgcttacagtcgcagatggaattccgacagtcaccggggat
gcagggcggctgacccaactcttcgagaatctcttccgaaatgcaatcgagcacggtggt
gccgacgtcacggtgaccgtgggtggactagacggagacgatggattctacgttgaggat
accggcagcgggattccccaggagaagcaagacgacgtgttcaaacacggcgtcacgtcc
agcgaggggggaaccgggttcggcctctcgattgtggccgacatcgcgaaggcgcacggt
tggacggtttcggtgacagacggaagcaatggcggggcacggtttgagttcaagcggtcg
aaatag
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