Haloferax volcanii SVX82: SVXHx_3196
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Entry
SVXHx_3196 CDS
T08885
Symbol
sua7
Name
(GenBank) Transcription initiation factor TFIIB, Brf1 subunit/Transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
hln
Haloferax volcanii SVX82
Pathway
hln03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hln00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SVXHx_3196 (sua7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hln03021
]
SVXHx_3196 (sua7)
Transcription machinery [BR:
hln03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
SVXHx_3196 (sua7)
Prokaryotic type
Archaeal type
TFB
SVXHx_3196 (sua7)
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Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
DUF1272
Motif
Other DBs
NCBI-ProteinID:
WEL27404
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All DBs
Position
pSVX82-1:complement(215598..216785)
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AA seq
395 aa
AA seq
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MGTKPTRELSRGGCRWLGTRFRTRCRTGRVLGDTTSLQRQSTCEHVWCCDSVINRPSSRS
QPIRDGDDVFGPLKGAGRSEMRRAVFEMATRDVYERQFDESCGKSCGNASCPECGGQVIT
DAGERRCDSCGLIIDGHGIDRGPEWRSFERDERKRVGMPRTPTRHDHGLATEIGRHVDAN
GTPLPGERRQQLSRLRTQHSRSRYQSSRERRLAHGLDEVGRLAGALDLPDSLRDQACRCF
RSAQQADLLPGRSIEAVAAASVHAACRCAGLSRTLAELAPLARVAESRVRSAYNALNTEL
GLPAKPVTPVEFVPRVADALDVTDQIRRRARSLAETSSSEWAHRGANPHAVAAACVYTAA
VERDWPLTQARVAAVSDTSTQTIRTHHQTLCEARR
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
gtgggcacgaagcccacgagggagttatcaaggggtggatgcagatggcttggtacgcga
ttccgcacccgttgcagaacagggcgcgtcttgggtgacacgacgagcctgcaacggcaa
tctacctgtgagcatgtttggtgttgtgattcagtcattaatcgcccctccagccgaagc
cagcctattcgagacggcgacgatgtttttgggcccctgaagggtgcggggcgcagcgag
atgcgtcgcgcggtgttcgagatggcgacacgagatgtctacgagcgacagttcgacgaa
tcgtgcgggaaatcctgtgggaacgcctcctgtccagagtgtggtgggcaggtcattacg
gacgctggcgagcgacggtgcgactcctgtggtctcatcatcgacggtcacggcatcgac
cgcggtcccgagtggcggtcgttcgaacgtgacgagcgcaagcgagtcgggatgccgcga
acgccgacgcgacacgatcacggcctcgccaccgagatcggacgacacgtcgacgcgaat
gggacgccgcttccgggcgagcgacgacagcaactctcccgactccgcactcagcacagt
cggagtcggtatcaatcgagtcgtgagcgacggttggctcacggattggacgaagtcggg
cggctcgccggcgcactcgacctccccgacagcctgcgtgaccaagcctgccggtgcttc
cggtctgctcagcaggcggatctgttgccggggcggtcgatcgaagcagtcgcggctgca
agcgtccacgcggcctgtcgatgtgcggggctttcgcggacgctcgctgaacttgcccca
ctcgcacgggtggctgaatcgcgcgtccggtcggcgtacaatgcactcaatacagaactc
gggctgcctgcgaagcccgtcacaccagtcgagttcgttccgcgagtggcggatgcgctt
gatgtgactgaccagattcggcgacgagcacggtcgttagccgagacatcaagtagtgag
tgggctcatcgtggcgcgaacccacatgcagtcgctgcagcgtgtgtgtacacggccgct
gtggagcgtgactggccgctcacgcaggcgcgtgttgcggccgtgagtgatacctcaact
caaacgattcgaacgcaccaccagacgttgtgtgaagcacgtaggtga
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