Haloferax volcanii SVX82: SVXHx_3259
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Entry
SVXHx_3259 CDS
T08885
Symbol
sua7-3
Name
(GenBank) Transcription initiation factor TFIIB, Brf1 subunit/Transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
hln
Haloferax volcanii SVX82
Pathway
hln03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hln00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SVXHx_3259 (sua7-3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hln03021
]
SVXHx_3259 (sua7-3)
Transcription machinery [BR:
hln03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
SVXHx_3259 (sua7-3)
Prokaryotic type
Archaeal type
TFB
SVXHx_3259 (sua7-3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
DZR
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
WEL27467
LinkDB
All DBs
Position
pSVX82-1:269583..270662
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AA seq
359 aa
AA seq
DB search
MLSNNASEKTVSDVQSTTTEEGGHEPTVEHEPSGRSACPECEGQVITEDEQSFCTDCGLI
VADEWVDLSPTLNDLGLVGDADQSIETVDPLRTDKGLHTKIGRNTDGRGNPLSNEQWEKV
QRLRKWHKRMQFGEKRKRTKRLNEGLRDVEMIGGNLNLPDHVIKQAAQHLRSASEARLPG
GRMAWEALAGGAVLLAARASSVDWDEIDVAVATHTKAPHERVCAAARKIRCECGFDVPLI
RPNAVMEVVDALDDDAIPGARAVRTWRLAQHLMKLGDQVPVGPGTPRCTVAASALYAADR
LLSRKHLTQAQVAAAASTIVPTSRNRIARYSRELVDAYEAEHGTDDPGVGLEEERDTLR
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgttgagtaacaacgcgagcgaaaagacggtttcggacgtacagagtacgaccaccgag
gaaggcggtcacgagccgacggtcgaacacgagccgtcgggccggtcggcctgtcccgag
tgtgagggccaggtgatcaccgaagacgagcagtcattctgcacggactgtgggctgatc
gtcgccgacgagtgggtggacctgagcccgacgctgaacgacttgggcctggtcggggac
gctgaccagagcatcgagacggtagacccgctccggacggacaagggcctgcacacgaag
atcgggcggaacaccgacggtcgcggtaatcccctgagcaacgagcagtgggagaaggtc
cagcgcctccggaagtggcacaagcggatgcagttcggcgagaagcgcaagcgaacgaag
cggctcaatgaggggctgcgggatgtcgagatgatcggcggcaacctgaacttgccggac
cacgtcatcaagcaggcagcgcaacatctccggagcgcctcggaagcgcggctgccgggc
gggcggatggcctgggaggcactcgccggcggcgccgtcctgttggccgcgcgggcctca
tcggtcgactgggacgagattgacgttgcggtcgcgacgcacaccaaggcgccccacgag
cgggtgtgcgctgcggcgcggaagatccggtgtgaatgcgggttcgacgtgccgctcatc
aggcccaacgccgtgatggaggtcgtcgacgcgcttgatgacgacgctatccccggggcg
cgagccgtgcggacgtggcggctggcccaacacctgatgaaactcggcgaccaggtgccg
gtcgggccgggaacaccacggtgcaccgtcgcggcgtcggcgctgtacgcggcggatcgg
ctgctctcgcgcaagcacctcacgcaagcgcaggttgccgcggcggcgagcacgatcgta
ccgacgtcccgaaaccggatcgcacggtacagtcgggagctcgttgacgcctacgaagcc
gaacacggcactgacgacccgggtgtcggcctcgaagaagaacgggacaccctgcgctga
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