Haloferax volcanii SVX82: SVXHx_3347
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Entry
SVXHx_3347 CDS
T08885
Symbol
dppd2
Name
(GenBank) ABC-type dipeptide/oligopeptide/nickel transportsystem, ATPase component
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
hln
Haloferax volcanii SVX82
Pathway
hln02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hln00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SVXHx_3347 (dppd2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hln02000
]
SVXHx_3347 (dppd2)
Transporters [BR:
hln02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
SVXHx_3347 (dppd2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
DUF8228
AAA_21
AAA_22
AAA_16
AAA_5
PRK
ATP-synt_ab
NACHT
NB-ARC
AAA_29
RsgA_GTPase
AAA_18
AAA
AAA_25
Mg_chelatase
Beta-prop_CATSPERD
Motif
Other DBs
NCBI-ProteinID:
WEL27555
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Position
pSVX82-1:complement(354583..357120)
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AA seq
845 aa
AA seq
DB search
MSDTLLTVRDLHTHFRTDAGTVRAVDGISFEVQRGEVLGIVGESGAGKSVAARSIMRLID
SPGVIVNGEVRFEDDLLVGVERGDAPDDEPRQDPEMLSSREIRERIRGREIAMIFQDPTE
SLNPVFTVGEQLSEIIGLNRDVSAAEAEAIAVERLREVGIPEAERRMDDYPHEFSGGMRQ
RVLIAMAFACEPSLVIADEPTTALDVTVEAQILDLVKDLAARYDTSFVWVTHDMGVVAEI
CDRVAVMYLGEIVEQATVDDLFHDTKHPYTEALLGSIPRPDRDVDGLSPIEGIMPEAINP
PQGCRFHTRCPHAREACLHAHPDARRVDGGGDEDGDVAMQMQTADGTTLADAEVAAASSH
RAACLRNDAFAEAGYWESAPLDDAESESASAAAESESESEPESASASASAGDAADAAVTA
NAATTGSTFDPDADPLLSVRDLRKYFDASDGFLDRLRFDRDAGLLPFSADREHVRAVDGV
SFDILPGETLGLVGESGCGKSTLARTLLRLVDPTSGDIVFDGENLAELSKEELRKRRKRM
QFVFQDPQASLDPRMTVGEIVEEPMRAHGLYEGDREGRARELLETVGLDADHYNRYPHQF
SGGQRQRVNLARALSVDPDFIVCDEPTSALDASVQAQVLNTMKELQDEFGLTYLFISHDL
SVIRHVCDRVAVMYLGELVELADKDDLFESPKHPYTRALLSSIPVPDPRVSRETVPLSGD
VPSPIHPPSGCRFHTRCPSLVAPAELDLSDDEWDRVRRFVRAVQRESPDAADDDARATYF
PDGLPAGDAGEAVERALSLAADGAWRDAASLLTETFVEPSVCTSEVPALESPDELDRIVS
CHHYS
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatacgctactcaccgtccgcgacctgcacacccacttccgcaccgacgcgggg
accgttcgggccgtcgacggtatctcgttcgaggtacagcgcggcgaagtgctcggcatc
gtcggcgaaagcggcgcgggaaagagcgtcgcggcgcggagcatcatgcgcctcatcgac
tcgccgggcgtcatcgtcaacggcgaggtccgcttcgaagacgacctgctcgtcggcgtc
gagcgcggcgacgcccccgacgacgaaccgcggcaggaccccgagatgctgtcgagccgc
gagatacgcgagcgcatccgaggccgcgaaatcgcgatgatatttcaggaccccacggag
agcctcaacccggtgttcaccgtcggcgagcagttgagcgagattatcgggctcaaccgc
gacgtgtcggcggccgaagccgaggccatcgccgtcgagcgcctccgcgaggtcggcatc
cccgaggccgaacgccggatggacgactacccccacgagttctccggggggatgcgccag
cgcgtcctcatcgccatggcgttcgcgtgcgaaccgagcctcgtcatcgccgacgagccg
accaccgcgctcgacgtgaccgtcgaggcgcagattctcgacctcgtgaaggacctcgcg
gcgcgctacgacacgtcgttcgtctgggtcacccacgacatgggcgtcgtcgccgagata
tgcgaccgcgtggccgtgatgtacctcggcgaaatcgtcgagcaggcgaccgtcgacgac
ctcttccacgacacgaaacacccctacaccgaggcgcttctcgggtcgattccgcggccc
gaccgcgacgtggacggcctgtcgcccatcgagggcatcatgccggaggccatcaatccg
ccgcagggctgtcgcttccacacgcggtgtccgcacgcccgagaggcgtgtctgcacgct
caccccgacgctcggcgcgtcgacggcggcggtgacgaagacggtgacgtggcgatgcag
atgcagactgccgacgggacgaccctcgcggacgcggaagtcgccgccgcctcgtcccac
cgagcggcgtgtctgcggaacgacgcgttcgcggaggccggctactgggagagcgccccg
ctcgacgacgccgagtcggagtcggcttcggccgccgccgaatcggaatcagagtcagag
ccggagtcggcgtcggcgtccgcctccgcaggtgacgccgccgacgccgccgtcaccgca
aacgccgccaccaccgggtccactttcgaccccgacgccgacccgctgctcagcgtgcgc
gacctgcggaagtacttcgacgcgagcgacggcttcctcgaccgcctccggttcgaccgc
gacgcgggactcctccccttctcggccgaccgcgagcacgtccgcgcggtcgacggcgtc
tcgttcgacatcctgcccggcgagacgctcggcctcgtcggcgagtcgggctgcgggaag
tccacgctcgcgcggacgctcctccggctggtcgacccgacctccggcgacatcgtcttc
gacggggagaacctcgccgaactgtcgaaagaggagctacggaagcgccgcaagcgcatg
cagttcgtcttccaggacccgcaggcgtcgctcgacccgcggatgaccgtcggcgaaatc
gtcgaggagccgatgcgggcccacgggctctacgagggcgaccgcgaggggcgggcgcgc
gaactgctggagacggtcggtctcgacgccgaccactacaaccgctacccgcaccagttc
tccggcggccagcgccagcgggtcaacctcgcgcgggcgctgtcggtcgaccccgacttc
atcgtctgcgacgagccgacctcggcgctcgacgcgtcggtgcaggcgcaggtgctcaac
acgatgaaggaacttcaagacgagttcgggctgacgtacctgtttatcagccacgacctg
agcgtcatccgccacgtctgcgaccgcgtggccgtgatgtacctcggcgaactggtcgaa
ctcgccgacaaggacgacctgttcgagtccccgaagcacccctacacccgggcgctcctc
tcgtcgattccggtgcccgacccgcgggtgtcccgcgagaccgtcccgttgtccggcgac
gtgccgtcgccgattcacccgccgagcggctgccggttccacacccgatgtccgagcctc
gtcgccccggcggaactcgacctcagtgacgacgagtgggaccgcgtgcgccggttcgtc
agagccgtccagcgcgagtccccggacgcggccgacgacgacgcgagagcgacctacttc
cccgacggcctccccgccggcgacgccggagaagccgtcgagcgcgcgctctcgctcgcg
gccgacggcgcgtggcgcgacgccgcgtcgctcctgaccgagacgttcgtcgagccgagc
gtctgcacctccgaggtgccggcgctggagtcgcccgacgaactcgaccgtatcgtcagc
tgtcaccactactcctga
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