Haloferax volcanii SVX82: SVXHx_3512
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Entry
SVXHx_3512 CDS
T08885
Symbol
ugpB5
Name
(GenBank) ABC-type sugar transport system, periplasmic component
KO
K05813
sn-glycerol 3-phosphate transport system substrate-binding protein
Organism
hln
Haloferax volcanii SVX82
Pathway
hln02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hln00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SVXHx_3512 (ugpB5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hln02000
]
SVXHx_3512 (ugpB5)
Transporters [BR:
hln02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative sn-Glycerol 3-phosphate transporter
SVXHx_3512 (ugpB5)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
WEL27720
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All DBs
Position
pSVX82-1:complement(539109..540590)
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AA seq
493 aa
AA seq
DB search
MSQYMPENGPIGERAETTNRAIGRTTSRRGFLATVGAVGVAGLAGCSGGGGDSPTGTEGG
SGSTEQSGTTAGTSGAQDVTVSFWHIFGGELGQTLGDMAAEFSQQNDGITIEAVNNGGYR
QNLNQSLQASRAGDPPGIVQIFEVGTRLALDSGSFTPVEEILPEEEIDFDDFLPSVLNYY
RMDGTLNSMPFNSSNTIMLYNKSAFEQAGLDPESPPRSLAEVRQAAQTIVDQTDMESGIS
WPNHTWMQVEQQFAKQDQVLVNQENGRDGRPDQTFFNSEAGRSVYSWWKGMAQDGLYLNP
GIEAWGEARQAFLTQKVPMLWDSTSNIVSMQSGAKENGFELGSGYLPTPDGANTGVVIGG
GSLWVPDALSDEKKQAAGEFIAYVTQTEQQARWHRNSGYFPVRQSSIDQLTDDGWFDNNP
NFSTAFDQLQDTEDTPATRGAVMGVFPKTRSINEEISVSIINDQLGVEEGLSRMDTQVGE
ALAGYNGNYDGSQ
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagtacatgcctgaaaatggccctatcggcgagcgagccgaaacgacgaaccga
gctatcggacgcacaaccagtcggcgcggattcctcgcgacggtgggggccgtcggcgtc
gcgggactcgcgggctgttccggcggcgggggcgactcaccgaccgggaccgagggcgga
agcgggagcaccgaacagtcgggaacgacggccgggacatccggcgcgcaggacgtgacc
gtctcgttttggcacatcttcggcggcgaactcggccagacgctgggagacatggccgcc
gagttctcacagcagaacgacggaatcaccatcgaggcggtcaacaacggcggctaccgg
cagaacctcaaccagtcgttgcaggcgtcgcgggccggcgacccgccgggtatcgtccag
atattcgaggtcgggacgcgactcgcgctcgacagcggctcgttcacgccggtcgaggag
attctgccggaagaggaaatcgacttcgacgacttcctgccgtcggtcttgaactactac
cgcatggacgggacgctgaactcgatgccgttcaactcctcgaacaccatcatgctctac
aacaagagcgcgttcgagcaggcgggcctcgaccccgaaagcccgccgcggagcctcgcg
gaggtccggcaggccgcacagaccatcgtcgaccagaccgacatggagagcggaatcagc
tggccgaaccacacctggatgcaggtcgaacagcagttcgccaaacaggaccaagtgctc
gtgaaccaagagaacggccgcgacggtcgacccgaccagacgttcttcaactccgaggcg
ggccgcagcgtctactcctggtggaaggggatggcccaagacggcctctatctcaacccc
ggaatcgaggcgtggggcgaagcgcgacaggcgttcctcacccagaaggtgccgatgctg
tgggactccacgtcgaacatcgtctcgatgcagtccggcgcgaaggagaacggcttcgaa
ctcggctccggctacctgccgacgcccgacggtgcgaacaccggcgtcgtcatcggcggg
gggtcgctgtgggtgcccgacgccctctccgacgagaaaaagcaggccgcgggagagttc
atcgcctacgtcacccagaccgagcagcaggcgcgctggcaccgcaacagcggctacttc
ccggtccgacagagctccatcgaccagctcacggacgacggctggttcgacaacaacccc
aacttcagcacggcgttcgaccagctacaagacaccgaagacacgcccgcgactcgcggc
gcggtgatgggcgtgttccccaagacccggtcgattaacgaggagatatcggtcagcatc
atcaacgaccaactcggtgtcgaggagggactgtcgcggatggacacgcaggtcggcgag
gcgctcgccgggtacaacggcaactacgacgggagccagtag
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