Haloferax volcanii SVX82: SVXHx_4003
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Entry
SVXHx_4003 CDS
T08885
Symbol
dape
Name
(GenBank) Succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
hln
Haloferax volcanii SVX82
Pathway
hln00300
Lysine biosynthesis
hln01100
Metabolic pathways
hln01120
Microbial metabolism in diverse environments
hln01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
hln00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SVXHx_4003 (dape)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hln01002
]
SVXHx_4003 (dape)
Enzymes [BR:
hln01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
SVXHx_4003 (dape)
Peptidases and inhibitors [BR:
hln01002
]
Metallo peptidases
Family M20
SVXHx_4003 (dape)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
WEL27755
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All DBs
Position
pSVX82-2:complement(1753..3102)
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AA seq
449 aa
AA seq
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MSSDPPAVVASLREHREDVVDLAATLVGHDTQNPPGDTRDLASWVESFFADLGLDAERVA
ADPTKPNLVATLPGATDRTLVLLGHLDTVPFDAGEWTRDPLGERAGNRLYGRGATDMKGA
VAAMLAVANAYVETDTVPSTTLVFAFVSDEEVAGSAGLPTLLDRRGLAADACVIGETTCE
SDRHSVTVADRGSIWLELEATGTAAHGSRPMLGENAIHRLYRAVSDIESTLDDYRFEFDP
AVRALVDESVEYYAPRFGADAARELFERPSVNLGVLSGGDRVNVVPDAARAKLDIRVTAG
VETAAVLDRVREVVAGHDGVETSDADWSVGTFEDPDSALADAVVSVAEGVTGGRVYRRSA
TGGGDAKRMRNAGVPTVEFGLGTETAHAVDEFTTVEALVGNAEVYARLPDELLRQFDSGT
RTFDSTGVSPADTTPSRRDRRENTSDDTR
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgacccacccgccgtcgtcgcctccctccgcgagcaccgcgaggacgtcgtc
gacctcgcggcgacgctcgtcggccacgacacgcagaacccgccgggagacacgcgggac
ctcgcgtcgtgggtcgaatcgttctttgcagacctcggtctcgacgccgagcgcgtcgcc
gcggacccgacgaagccgaacctcgtggcgacgctcccgggcgcgacagaccggacgctc
gtcctgctggggcacctcgatacggtcccgttcgatgctggcgagtggacgcgcgacccg
ctcggtgaacgggcgggaaaccggctctacggacgcggcgcgaccgacatgaagggagcg
gtcgccgcgatgctcgcggtggcgaacgcgtacgtcgaaaccgacacagtgccgtcgacg
accctcgtgttcgcgttcgtcagcgacgaggaagtcgccgggagcgcggggctgccgacg
cttctcgaccggcgcggactcgccgcggacgcctgcgtcatcggcgagacgacctgcgag
agcgaccgccactcggtgaccgtcgcggaccggggaagcatctggttggaactcgaagcg
acggggaccgccgcccacggctcccgaccgatgctcggtgagaacgcgattcaccggctc
taccgcgccgtgagcgacatcgaatcgacgctcgatgactaccgattcgagttcgacccc
gcggtgcgggcgctcgtcgacgagtccgtcgagtactacgcgccgcgattcggcgcggat
gcggcgcgagagctgttcgagcggccgtcggtcaatctgggcgtcctctcgggcggcgac
cgggtgaacgtcgtccccgacgcggcgcgggcgaagctcgatattcgcgtgacggcgggc
gtcgagacggcggcggtgctcgaccgcgttcgggaggtcgtcgccggtcacgacggcgtc
gagacttcggacgcggactggtcggtcgggacgttcgaagaccccgacagcgcgctggcg
gacgccgtggtctcggtcgctgaaggcgtcaccggcgggcgtgtgtaccgccggagcgcg
accggcggcggcgacgcgaagcgaatgcgaaacgccggcgtcccgaccgtcgagttcggg
ctggggaccgagacggcgcacgcggtcgacgagttcaccaccgtcgaggcgctcgtcggc
aacgccgaggtgtacgcccgcctccccgacgagttgttgcggcaattcgatagtggtacc
agaacgtttgattcgacgggcgtatcaccagcagacacgactccttcgcggcgcgaccga
cgagagaacacctccgatgacacccgataa
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