Natrinema longum: J0X27_04445
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Entry
J0X27_04445 CDS
T07116
Name
(GenBank) mRNA surveillance protein pelota
KO
K06965
protein pelota
Organism
hlo
Natrinema longum
Pathway
hlo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hlo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
J0X27_04445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hlo03019
]
J0X27_04445
Messenger RNA biogenesis [BR:
hlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
J0X27_04445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_1
eRF1_3
eRF1_2
NtrZ
Motif
Other DBs
NCBI-ProteinID:
QSW86081
UniProt:
A0A8A2UB85
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All DBs
Position
complement(896268..897335)
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AA seq
355 aa
AA seq
DB search
MQIKDREQVEGGRERVTVVPESVDDLWHLQYVLEPGDRVAGDTTRRIQRNDDQMRDTGGE
REHMWVAIAVETIEFHKFANRLRVGGEIVACSREDQLDFHHTLNVEARDEISIEKRFKPD
QVARLEEAEEATENPDVAIATVEEGQAHVHTVAQYGTEERATITGTTGKGEYARGRSELF
EELATVLTRLEVDAIILAGPGFTKQDAYKYLEDNEPEVADLITMVDTAAVGDRGVHEVLK
RGAVADVQEETRIESEAEYIDELTRRIADGAKAAYGPEQVKKAAEFGAIERLLVLDDRLQ
RERGPDGEWAISVDEIVRTTEQKGGDVTVFSSEFPPGQQLSNLGGIAALLRYRLE
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcaaagaccgggagcaggtcgagggcggccgcgagcgggtcaccgtcgtcccc
gagagcgtcgacgacctctggcacctgcagtacgtcctcgagcccggcgatcgcgtcgcg
ggcgatacgactcgacggatccagcgcaacgacgaccagatgcgggacacgggcggggaa
cgcgaacacatgtgggtcgccatcgccgtcgagacgatcgagttccacaagttcgccaac
cggctgcgggtcggcggcgagatcgtcgcctgctcgcgcgaggatcaactcgactttcac
cacacgctcaacgtcgaagcgcgcgacgagatttcgatcgaaaagcgattcaagcccgat
caggtggcccgcctcgaggaggccgaggaggcgaccgagaaccccgacgtcgcgatcgct
acggtcgaagaaggacaggctcacgtccataccgtcgcccagtacggcaccgaagaacga
gcgacgatcaccggcacgaccggcaagggcgagtacgcccgcgggcgctcggagctgttc
gaagagctcgcgacggtcctcacgcgcctcgaggtcgacgcgatcatcctcgccgggccc
ggctttacgaagcaagacgcctacaagtacctcgaagacaacgagcccgaggtggccgac
ctgatcacgatggtcgacacggcggccgtcggtgaccggggcgtccacgaggtgctcaaa
cgcggcgcagtcgcggacgtccaggaggagacccggatcgaaagcgaggccgagtacatc
gacgaactcacgcggcgcatcgcggacggtgccaaggcggcgtacggccccgaacaggtg
aaaaaggccgcggagttcggtgcgatcgagcgcctgctcgtgctcgacgatcgattacag
cgtgaacgcggcccggacggcgagtgggcgatcagcgtcgacgagatcgtccgtacgacc
gagcagaaaggtggcgacgtgacggtcttctcgagcgagttcccgcccggacagcagctc
tcgaatctcggcgggatcgcggcgctgttgcggtatcgactcgagtga
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