Natrinema longum: J0X27_04870
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Entry
J0X27_04870 CDS
T07116
Name
(GenBank) transcription initiation factor IIB 2
KO
K03124
transcription initiation factor TFIIB
Organism
hlo
Natrinema longum
Pathway
hlo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hlo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
J0X27_04870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hlo03021
]
J0X27_04870
Transcription machinery [BR:
hlo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
J0X27_04870
Prokaryotic type
Archaeal type
TFB
J0X27_04870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
HTH_AsnC-type
Zn_ribbon_tTFIIB
Cas12f1-like_TNB
HTH_24
HTH_11
HTH_23
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QSW86155
UniProt:
A0A8A2UD77
LinkDB
All DBs
Position
965847..966815
Genome browser
AA seq
322 aa
AA seq
DB search
MTQTIVDTTADELARNGERDTDRERRASECPECAGTIDHDEEHGERTCTECGLVLDADAI
DYGPEWRTLDDEDGRRVGPPVSTLRHDKGLSTTIGWQNEDAYGNQLSGRKREQLQRLRTW
NERFTSKNAAERNLKQAFGEIERMASALGLPEPCRETAGVLYRRAVDDGLLPGRSIEAVS
TACLYAAARQHGTPRTLVAFESVSRVEKLPVQRAYRYLSTELGLQIEPADPVHYLPQYAS
ELEISDDAERVAREILEAAKRRGLHSGRSPAGLAASAIYGAARLTNDRLTQERIGEETGV
SSVTVRNRYRELLNAYGEARDR
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgactcagacgatcgtcgatacgactgccgacgaactggcccggaacggagagcgcgac
acggaccgcgagcgacgggcgtcggagtgtccggagtgtgcgggtacgatcgatcacgac
gaagaacacggcgagcgaacgtgtacggagtgtggactcgtactcgacgcggatgcgatc
gattacggccccgagtggcgcaccctcgacgacgaagacggacgacgggtcgggccaccg
gtatcgacgctccgacacgacaaggggctcagtacgacgatcggctggcaaaacgaggac
gcctacgggaatcaactctccgggcgaaagcgcgagcaactccagcggttacggacgtgg
aacgagcgatttacgtcgaaaaacgccgcggaacggaacctgaaacaggccttcggcgag
atcgaacgcatggcgtcggcgctgggactgccggagccctgtcgcgagacggccggcgtc
ctctatcgccgtgccgtcgacgacgggctgttaccgggtcgctcgatcgaggccgtttcg
actgcctgtctgtacgcggccgccagacagcacggcaccccacggacgctggtcgcgttc
gagtcagtgagtcgcgtcgaaaaactccccgttcaacgggcgtaccgctatctctcgacg
gagctcggcctccagatcgagcccgccgatcccgtccactacctcccacagtacgcctcc
gaactcgagatcagcgacgacgcagagcgggtcgcacgagagatcctcgaggcggccaag
cgccggggcctccacagcgggcggagtccggccgggctcgcagcgtcggcgatctacggc
gctgcgcggctcacgaacgaccgactgacacaggaacggatcggcgaagaaaccggcgtg
agttcggtgaccgtccggaaccgataccgggagttactgaacgcctacggggaggctcgt
gatcgatag
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integrated database retrieval system
