Natrinema longum: J0X27_06570
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Entry
J0X27_06570 CDS
T07116
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hlo
Natrinema longum
Pathway
hlo03420
Nucleotide excision repair
hlo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J0X27_06570
03430 Mismatch repair
J0X27_06570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hlo03400
]
J0X27_06570
Enzymes [BR:
hlo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J0X27_06570
DNA repair and recombination proteins [BR:
hlo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J0X27_06570
MMR (mismatch excision repair)
Other MMR factors
J0X27_06570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_30
UvrD_C_2
AAA_11
Herpes_ori_bp
GDC-P
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QSW86476
UniProt:
A0A8A2UCQ0
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All DBs
Position
1321475..1323349
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AA seq
624 aa
AA seq
DB search
MTTTDTTVTRLFGGPGSGKTTALLDHVEDILEQEGVTFRDILVVSYTRAAAQEVRERLAD
RLDESPRALQGNVCTMHAKAYELLDLSRSDVIGESDKEEFCEEYGIEYEDEYSGAGRRTA
RSTTIGNKVIATSQWLQRTSREVTDWYDVPFQWDEEEVRLPPEIDPNAQEGNKYTPTWPS
DDDRIDVPETIRAWRSYKGEHGKIGFADMLERVKQRSLLPSVDYLVIDEFQDITTLQYDV
YEEWKPHMEQVLIAGDDDQVVYSWQGADPALLLEEEVDEDVILPNSYRLPSNVLNAVNKE
IRHIDHRQDKDLKPRTEGGAVEARTNGSMLDVVRMVRRTLVEGDGTIMVLFRARYQMFQF
IDEFITEGVPFTSLTDQRMWTDRLTQYVRAVEAIDAGEDVTGLQARRLADMLQESAFGTN
DRDALFDEIDERQEEAGIDDLEQLMIPSEVIVDHAPFMPDPASAADMLRKVTNFQKKSVR
SYFGIGEYTGMDTDRVRVGTIHSAKGREADHVFVGTDLTEKVVEQMVATVDDPEAIPGCE
EFTKTTSPVPVLTDNERRVFYVGMSRARERLVLLENLVDGAPTLPIDVLLQNRLTDSTLE
ELIEQAQEPIETDADELEAEAEAP
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgactacgacggacacgacggtcacccgcctgttcggtggtccgggaagcggcaagacg
actgcccttctcgaccacgtcgaggacattctcgagcaggagggcgttacgttccgggat
attctcgtcgtctcgtatacgcgagcggcagcacaggaggttcgggagcgtctcgcagac
cggctcgacgagagcccgcgtgcgctgcagggaaacgtctgtacgatgcacgccaaggcc
tacgagctgctcgatctctctcggagcgacgttatcggcgagtcggacaaagaggagttc
tgcgaggagtacggtatcgagtacgaggacgagtattcgggtgccggccgccgaaccgct
cgatcgacgacgatcggcaacaaggtcatcgcgacgagccagtggctccagcggaccagc
cgtgaggtaaccgactggtacgacgtccccttccagtgggacgaagaggaagttcgtctc
ccacccgagatcgaccccaacgcccaggagggcaacaagtacaccccgacctggcccagc
gacgacgaccgaatcgacgttcccgagacgatccgggcctggcggtcctacaagggcgaa
cacggcaagatcggcttcgccgacatgctcgagcgggtcaaacagcggtccttgctgccg
agcgtcgactacctggtgatcgacgagtttcaggatatcaccacgctgcagtacgacgtc
tacgaggagtggaaaccccacatggagcaggtcctgatcgccggcgacgacgaccaggtc
gtctactcctggcagggtgccgaccccgcattgctcctcgaggaggaggtcgacgaggac
gtcatccttcccaactcctatcggctgccctcgaacgtgctcaacgcggtcaacaaggag
atccgtcacatcgatcaccgccaggacaaggacctcaagccccgtaccgaaggcggtgcc
gtcgaggcgcgcacgaacggctcgatgctcgacgtcgtccggatggttcggcgcacgctc
gtcgagggcgatggcacgatcatggtactgttccgggcccgctaccagatgttccagttc
atcgacgagttcatcaccgagggcgtccccttcacctcgctgaccgaccagcggatgtgg
accgaccgactcacccagtacgtccgcgccgtcgaggcgatcgacgcgggtgaggacgtc
accggcctgcaggcccgtcgactcgccgacatgctccaggagtcggcgtttggcaccaac
gatcgcgacgccctcttcgacgagatcgacgagcgccaggaggaggccggtatcgacgac
ttggagcaactcatgatccccagcgaggtcatcgtcgaccacgcgccgttcatgcccgat
cccgcctcggcagccgacatgctccggaaggtcacaaacttccagaagaagagcgtccgc
tcgtacttcgggatcggcgagtacacgggaatggacaccgatcgcgtccgcgtcggcacg
atccactccgcgaagggccgcgaggcggaccacgtgttcgtcggcaccgatctcaccgaa
aaggtcgtcgaacagatggtcgccaccgtcgacgatcccgaggcgatccccggttgcgag
gagttcaccaagaccacctcgcccgtgcccgtgctgacggacaacgaacgccgcgtcttc
tacgtcggcatgtcccgcgcccgcgaacggctcgtcttgctcgagaacctcgtcgacggc
gcaccgacgctcccaatcgacgtcctattgcagaatcggctcaccgactcgacgctcgag
gaactgatcgagcaggcccaggaacccatcgagacggacgcggacgagctcgaggcggaa
gccgaagcgccgtga
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