Natrinema longum: J0X27_09250
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Entry
J0X27_09250 CDS
T07116
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hlo
Natrinema longum
Pathway
hlo03022
Basal transcription factors
hlo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hlo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
J0X27_09250
09124 Replication and repair
03420 Nucleotide excision repair
J0X27_09250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hlo03021
]
J0X27_09250
03036 Chromosome and associated proteins [BR:
hlo03036
]
J0X27_09250
03400 DNA repair and recombination proteins [BR:
hlo03400
]
J0X27_09250
Enzymes [BR:
hlo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
J0X27_09250
Transcription machinery [BR:
hlo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
J0X27_09250
Chromosome and associated proteins [BR:
hlo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
J0X27_09250
DNA repair and recombination proteins [BR:
hlo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
J0X27_09250
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
nSTAND_NTPase5
SLFN-g3_helicase
PhoH
nSTAND3
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
QSW83670
UniProt:
A0A8A2U311
LinkDB
All DBs
Position
complement(1876059..1878434)
Genome browser
AA seq
791 aa
AA seq
DB search
MTDWRTVFGHEQPYEPQVDGIETAIDTGQEGGYTVIEGACGTGKTMIALTAGIDLVRDPD
TDYERVLVLTSVKQQLRQFEADLETINETLPADWDPISGLTLVGKADVCPYNRENAAGID
DGNVYDRCETLRDRTRDLTGEGGDTTAKNLAARARSQQIGLADSGSGSKNTFLETAGEPT
PYPPELPEYGEGGPVGAETEYCPFYAQYLEDLPDDEENGSAAEAVPYDFTDVGMVTPEDL
VARSVAHGTCPHSVMGAALGEVEVVIGNYYHAFDPRTVGSFTGALLDESTFVVCDEAHML
EPRVRDLVSDGIADSTLRDAETELSRVIQPIKFEREGRQAEGGSKTADADLVRGELTDSD
VSFEELNRTLEFVRDLREELDRRVRAHLDRNYRGWQSNLTDLHDEEIPLRDPGEPAEDEL
SEWAREAGYGDADWVRAEAVGAIVERVLNEAEDEDRTRAAPAVGRVLGEWYRRGHTDYFR
EIELERTWDDTEPADSWRRAYNARLSLHNCVPSDAIGDRLGHFGGGILMSATLEPMDAFT
EVTGLQYLAREEDRPVVERRYGLHFPAENRESFAVAAPKFTYDNRGSPGEDNPTRRSYAD
AIGKVARLPGNVLVGMPSYAEAEWTAGVLEDRVDKPVLLDAASDDETTQSLKDEFFAGEG
KVLVTSLRGTLTEGVDYSGDRLAAAVVCGVPIVNTSSPRTTAVRRAYDDEFGDGFTYALT
IPAVRKARQAIGRVIRSPEDVGVRVLLDERYARDSWDSVRPYLPDDGEFQTVSPDMLDVG
LERFRGRLGSR
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgacggactggcggacagtgttcggccacgagcagccctacgagcctcaggtcgacggc
atcgagacggccatcgacaccgggcaggaaggcggctacaccgtcatcgagggtgcctgt
ggcaccggaaagacgatgatcgcgctcacggcggggatcgacctcgtgcgcgatcccgac
actgactacgaacgcgtgctcgtgctcacgagcgtcaaacagcaactgcgccagttcgaa
gcggacctcgagacgatcaacgagaccctccccgccgattgggacccgatttcgggactc
acgctcgtcgggaaggccgacgtctgtccgtacaaccgtgagaacgcggcggggatcgac
gacggcaacgtctacgatcgctgcgagaccttgcgggatcgcacccgcgacctcaccggc
gagggcggcgacacgacggccaaaaacctggccgctcgcgcccgaagccagcagatcggg
ctggccgacagcggcagcgggtcgaaaaacacgttcctcgagaccgcgggcgaacccacg
ccctacccgcccgagcttcccgagtacggtgagggtggtcccgtcggggccgaaacggag
tactgtccgttctacgcgcagtacctcgaggacctgcccgacgacgaggagaacggatcg
gccgcagaagcagttccctacgacttcaccgacgtggggatggtcacgcccgaggacctg
gtcgcccggtcggtcgcacacggcacctgtccccactccgtgatgggggctgccctcggc
gaggtcgaggtcgtgatcgggaactactaccacgccttcgatccgcggacggtcggctcc
tttaccggcgcgctactcgacgagtcgaccttcgtcgtctgcgacgaagcccacatgctc
gagccgcgcgtgcgcgatctcgtcagcgacgggatcgccgacagcacgctccgggacgcc
gaaaccgaactctcgcgggtcatccagccaatcaagttcgaacgcgagggacggcaggcc
gaaggtggttccaagaccgccgacgccgacctcgtccgcggagaactgaccgatagcgac
gtctcgttcgaggaactcaatcgaacgctcgagttcgtccgggacctccgggaggaactc
gaccgccgggtcagggcccatctcgaccggaactaccggggctggcaatcgaacctgacc
gaccttcacgacgaggagatcccgctccgcgacccgggcgagcccgccgaggacgaactc
tcggagtgggccagggaggcgggctacggcgacgccgactgggtccgcgccgaggccgtc
ggcgcgatcgtcgaacgagtcctgaacgaggccgaagacgaggaccgaacccgcgccgca
cccgccgtcgggcgcgtgctcggggagtggtatcgccgcggccacaccgactactttcga
gagatcgaactcgagcgcacctgggacgacaccgagccggcggactcgtggcggcgggcc
tacaacgcgcgtctctcgttgcacaactgcgtgccgagcgacgccatcggcgaccgcctc
ggacacttcggcggcggaatactcatgagtgcgaccctcgagccgatggacgcgttcacg
gaagtcacgggcctccagtacctcgcccgcgaggaggaccggccggtcgtcgagcgccgg
tacggcctgcacttcccggcggagaaccgcgagagcttcgcggtcgccgcgccgaagttc
acctacgacaatcgcgggagtccgggcgaagacaatccgacgcgacgatcctacgccgac
gcgatcgggaaggtcgcccggcttcccggcaacgtcctcgtcgggatgcccagttacgcc
gaagccgagtggaccgccggcgttctcgaggatcgggtcgacaaaccggtcctgctcgat
gccgcgagcgacgacgagacgacccagtcgctcaaagacgagttcttcgcgggcgagggg
aaggtactcgtcacgagcctccggggcacgctgaccgagggcgtcgactacagcggcgac
cgcctcgccgccgcggtcgtctgtggcgtgccgatcgtcaacacctcgagcccgcgaacc
acggccgttcgccgggcctacgacgacgagttcggcgacggcttcacgtacgcactcacg
attcccgcagtccggaaggcccggcaggcgatcggccgcgtcatccgcagccccgaggac
gtcggcgttcgcgtcttactcgacgagcgctacgcccgtgacagctgggactccgttcgg
ccgtaccttcccgacgacggcgagttccagacggtgagcccggacatgctcgacgtcggc
ctcgagcgcttccgggggcggctcgggtcgcggtaa
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