Natrinema longum: J0X27_10135
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Entry
J0X27_10135 CDS
T07116
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
hlo
Natrinema longum
Pathway
hlo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hlo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
J0X27_10135 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hlo03021
]
J0X27_10135 (rpoB)
Enzymes [BR:
hlo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
J0X27_10135 (rpoB)
Transcription machinery [BR:
hlo03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
J0X27_10135 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Auto_anti-p27
McsA
Motif
Other DBs
NCBI-ProteinID:
QSW83838
UniProt:
C5NSG5
LinkDB
All DBs
Position
2056815..2058644
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AA seq
609 aa
AA seq
DB search
MSSQQREAKVYVNGSLVGTHPDPHELAEQIREARRIGDVSEMVNVSVKDRTREVIVNADA
GRARRPLLVVEDGEPRIADQEIEALHEGDLEFEDLVDHGYIEFIDAEEEEDILVAVDEDD
LTENHTHLEIDPSLIFSIGAGMIPYPEHNASPRITMGAGMIKQSLGLPSANYRIRPDTRQ
HLLHYPQLSMVKTQTTEQIGYDERPAAQNFVVAVMSYEGFNIEDALVMNKASVERALARS
HFFRTYEGEERRYPGGQEDRFEIPSQDVRGARGEEAYNHLDEDGLVNPETKVDENSVLLG
KTSPPRFLEEPDDMGGLSPQKRRETSVTMRSGESGIVDTVTLMEGEDGSKLSKVSVRDER
IPELGDKFASRHGQKGVVGHLAPQEDMPFTEEGVVPDLVLNPHALPSRMTVGHILEMIGG
KLGSMEGRRVDGTPFLGEDEDELRQGLEDAGFNSAGKETMYSGISGEKIDAEIFVGVIFY
QKLYHMVSNKLHARSRGPVQVLTRQPTEGRAREGGLRIGEMERDVFIGHGAAMTLKERLL
DESDREFIHICANCGMSAVENVEQRRVYCPNCDEETDIHEIEMSYAFKLLLDEMKALGIA
PRLELEDAV
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccaacaacgagaggcgaaagtctacgtcaacgggtcgttggtggggacacac
cccgatccacacgaactcgcagaacagatccgcgaagcacgacgcatcggcgacgtcagc
gagatggtcaacgtctcggtcaaagatcgcacccgcgaagtgatcgtcaacgccgacgcg
ggacgggcccgacgacccctgctggtcgtcgaggacggcgaaccccgcatcgccgatcag
gagatcgaggcgctccacgagggcgacctcgagttcgaggatctcgtcgatcacggctac
atcgagtttatcgacgccgaggaggaagaggacatcctcgtcgccgtcgacgaggacgat
ctgaccgagaaccacacccacctcgagatcgacccgtcgctgatcttctcgatcggtgcg
gggatgatcccctaccccgagcacaacgccagcccccgcattacgatgggggcagggatg
atcaagcagtcgctggggctgccgagcgcgaactaccggatccggccggacacacgccag
cacctgctgcactacccccagctctcgatggtcaagacccagaccaccgagcagatcggc
tacgacgagcggccggcggcccagaacttcgtcgtcgccgtgatgagctacgaggggttc
aacatcgaggacgcgctggtcatgaacaaggccagcgtcgagcgcgcgctcgcacgctcg
catttcttccggacctacgagggcgaggaacgccgctaccccggtggacaggaggaccgc
ttcgagattccgagccaggacgttcgcggtgcccgcggcgaggaagcctacaaccactta
gacgaggacggtctcgtcaaccccgagacgaaagtcgacgagaactccgtcctgctcggc
aagacgagcccgccgcgcttcctcgaggagcccgacgatatgggtggcctctcgccccag
aagcgacgggagacctccgtcaccatgcgctcgggcgaatccgggatcgtcgacaccgtc
accctcatggagggcgaggacggctcgaagctctcgaaggtctcggtacgtgacgagcgg
atccccgaactcggggacaagttcgcatcgcgacacggtcagaagggggtcgtcggccac
ctcgcgccacaggaggacatgcccttcaccgaggagggcgtcgtccccgacctcgtcttg
aatccccacgccttgccgtcgcggatgaccgtcggtcacattctcgagatgatcggcggc
aaactcggttcgatggagggacgacgcgtcgacgggacgccgttcctcggcgaggacgag
gacgaactccgccaggggctcgaggacgccggcttcaactccgccggcaaggagaccatg
tactcgggcatctccggcgagaagatcgacgccgagatcttcgtcggggtcattttctac
cagaagctctaccacatggtctcgaacaagctgcacgcccgttcgcgcgggccggtgcag
gtgctgacccgacagccgacggaggggcgcgcccgcgagggtgggctccgtatcggggag
atggaacgcgacgtgttcatcggccacggggcggccatgacgctgaaagaacgactcctc
gacgagtccgaccgcgagttcatccacatctgtgcgaactgtgggatgagcgcggtcgaa
aacgtcgaacaacggcgtgtctactgtccgaactgcgacgaggagaccgatatccacgag
atcgagatgagctacgcgttcaagctcctcttggacgagatgaaggcgctgggtatcgca
ccgcgactcgaactggaggacgccgtctaa
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