Natrinema longum: J0X27_10820
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Entry
J0X27_10820 CDS
T07116
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hlo
Natrinema longum
Pathway
hlo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hlo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
J0X27_10820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hlo03021
]
J0X27_10820
Transcription machinery [BR:
hlo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
J0X27_10820
Prokaryotic type
Archaeal type
TFB
J0X27_10820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
A2L_zn_ribbon
Zn_ribbon_LysW
DZR_2
HTH_Tnp_ISL3
Anti-TRAP
DUF7560
Motif
Other DBs
NCBI-ProteinID:
QSW83959
UniProt:
A0A8A2U4M0
LinkDB
All DBs
Position
complement(2199058..2200038)
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AA seq
326 aa
AA seq
DB search
MTNAPSNTRVRRSEPETNEQETESEQEDLACPECAGNLVVDDEHGETVCEDCGLVVEEDS
VDRGPEWRAFDAAEKNEKSRVGAPTTNTMHDKGLSTNIDWRNKDAYGNSLGSRQREKMQR
LRKWNERFRTRDSKERNLKQALGEIDRMASALGLPTNVRETASVIYRRALDEDLLPGRSI
EGVSTACVYAAARQAGVPRSLDEIADVSRVEKNEIARTYRYVVRELGLEVQPADPESYVP
RFASGLELSDEAEHRARSLLQNAKEKGVHSGKSPVGLAAAAVYAAALLTNEKTTQAAVSD
VADISEVTIRNRYHELLEAEETIGMA
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgactaacgcaccatcgaatacgagagtacgacgtagcgaacccgaaacgaacgaacag
gagaccgaaagcgagcaggaggatcttgcctgccccgagtgtgcgggtaacctcgtcgtc
gacgacgaacacggtgagaccgtctgtgaggactgtggcttggtcgtcgaggaggactcg
gtcgaccgcggtcccgaatggcgcgcgttcgacgccgccgagaaaaacgagaagtcccgc
gtgggcgcgccgacgacgaacacgatgcacgacaagggcctctcgaccaacatcgactgg
cgcaacaaggacgcctacgggaactcccttggctcgcgtcagcgcgagaagatgcagcgc
ctgcgcaagtggaacgagcgcttccgcacccgcgactccaaggagcgcaacctcaagcag
gcactcggcgagatcgaccggatggcctccgcgctggggctgcccacgaacgtccgcgag
acggcaagcgtcatctatcgacgcgcgctcgacgaggacctcctccccggtcgctccatc
gagggcgtctcgacggcgtgtgtctacgccgccgcccggcaggctggcgtcccccggagc
ctcgacgagatcgccgacgtctcccgcgtcgagaaaaacgagatcgcccgcacctaccgc
tacgtcgtccgcgaactcggcctcgaggtccagccggccgatcccgagagctacgtcccc
cggttcgcctcgggactcgaactctccgacgaggccgagcaccgcgcgcgaagcctgctc
cagaacgccaaggagaagggcgtccactcgggcaagtcgccggtcggcctcgcagccgcc
gcggtctacgccgccgcactgctgaccaacgagaagaccacgcaggccgccgtctccgac
gtcgccgacatctccgaagtcaccatccgaaaccgctaccacgagctcctcgaggccgag
gagaccatcgggatggcctaa
DBGET
integrated database retrieval system
