Natrinema longum: J0X27_11320
Help
Entry
J0X27_11320 CDS
T07116
Name
(GenBank) PAS domain S-box protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
hlo
Natrinema longum
Brite
KEGG Orthology (KO) [BR:
hlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hlo03000
]
J0X27_11320
Transcription factors [BR:
hlo03000
]
Prokaryotic type
Helix-turn-helix
Other families
J0X27_11320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAT
PAS_4
PAS_9
PAS
PAS_3
HTH_10
GAF_2
PAS_8
GAF
GAF_3
HTH_20
Sigma70_r4
MEKHLA
GerE
HTH_24
DUF3863
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-ProteinID:
QSW86995
UniProt:
A0A8A2UHM1
LinkDB
All DBs
Position
2291016..2293001
Genome browser
AA seq
661 aa
AA seq
DB search
MDHHLAVDEFSALVSDHAVALFDSTGNVTSWNEGAKRLVGYDEERILGSHYRTFFPADAR
EAERPERLLERARSDGAVENEGVRVGSGGRQLWVREVLAALGDDGELGANAGDAEPAGYI
WYVSDRTDEHERERALREEKAVAETVVEVQPDILYAFDAAGNLIEWNEQFERVVGYRPDE
LAGMHPLRFIAPTDRDHIGDAIERILEEGERVTAEGRILTKDGARIPHEFNSARITDDDG
TVLGFTGVGRNISERKTRERELERLERLNAIVRRIDETMVAAESRDRIETAVVEEFAAAD
GYCFAGIGRERSVLTSDGHSWRPAVWAGIDSTSVGDVLASFIDPPTDTAGASPFETRRVQ
RYQHLQESAIDEWQADARERGYGSVAVVPIVATDRVFGVLVIAADDPSAFADRECEVLQE
FGVTIGHAINATAIRRLLYTDSVIELEFESTDRGDACIALSAETATTIAVDHVLPLDDVF
VYYLTVPDSDPGAVRDAAADLPAITELRCIDVSEDESYWEVVVRGSTISELLVGYGARLQ
SKVVRDGVASLTVQVSPDVDLREFVDAITSAYPNTRLVSKRTVDRPVETRGDFRQTVESN
LTEKQRLALEAAYHGGYFEWPTRNSDASEIADRLGIARQTFHQHLRVAQAKLLSAYFGAS
D
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggaccatcacctcgctgtcgacgagttcagcgcactcgttagcgatcacgccgtcgcg
ctgttcgattcgacagggaacgtcacctcgtggaacgagggggcaaagcgactcgtggga
tacgacgaggaacggatcctcggatcgcactaccggacgttcttcccggcggacgcgcgg
gaagccgaacgcccggagcggttgctcgagcgggcgcgatcggacggtgccgtagagaac
gagggagtgcgggtcgggagcggcggacgccagctctgggtccgcgaggtactcgccgcg
ctcggcgacgacggcgagctcggagcaaacgcgggcgacgccgaaccggcgggatacatc
tggtacgtctccgaccgtaccgacgaacacgagcgcgagcgggcactccgcgaggagaaa
gccgtcgccgagacagtcgtcgaggtgcaaccggacatcctctatgcgttcgatgcggcg
gggaatctgatcgagtggaacgagcagttcgaacgggtggtcggctaccggccggacgaa
ctcgccggcatgcatccccttcggttcatcgcaccgaccgaccgagaccacatcggcgac
gcgatcgaacgaatcctcgaggagggcgagcgcgtgaccgccgagggacggatcctcacg
aaggacggcgctcggatcccacacgagttcaacagcgctcggatcaccgacgacgacggg
accgtgctgggatttaccggagtcggtcgcaacatcagcgagcggaagacccgcgaacgg
gaactcgagcggctcgagcggctcaacgcgatcgtccggcggatcgacgagacgatggtc
gcggcggagtcccgggaccgaatcgagaccgcggtcgtcgaggagttcgcggccgccgac
gggtactgcttcgcgggtatcgggcgggaacgatctgtcctgacgagcgatggccactcg
tggcggcccgcggtctgggcgggaatcgactcgacgtcggtcggagacgtcctcgcgtcg
ttcatcgacccgccaaccgacacggccggcgcgtcgccgttcgaaacgcggcgcgtccag
cggtaccaacatctccaggagagtgccatcgacgaatggcaagccgacgctcgcgagcgc
ggctacggttccgtcgcggtcgttccgatcgtcgcaaccgatcgggtcttcggtgtgctc
gtgatcgccgccgacgacccgtcggcgttcgccgatcgagagtgtgaggtgttacaggag
ttcggggttaccatcggccacgcgatcaacgcgacggcgatccgacggctcctctatacg
gactcggtcatcgaactcgagttcgagtccaccgatcgtggggacgcctgtatcgccctc
tcagccgagactgccacgactatcgcggtcgaccacgtgttgcccctggacgacgtgttc
gtctactaccttaccgtacccgacagcgatcccggtgcggttcgcgacgctgcggccgat
ttacccgcgatcacggaactgcgttgcatcgacgtcagcgaggacgaaagctactgggaa
gtcgtcgtccgcgggtcgacgatcagcgaactgctcgtgggatacggtgcgcggctgcag
tcgaaagtcgttcgcgacggcgtcgcatcgctgacggttcaggtgagtcccgacgtagac
ctccgggagttcgtcgacgcgatcacgtcggcttaccccaacaccagactcgtctcgaaa
cggaccgtcgatcggccggtcgagacacgcggcgacttccggcagaccgtcgaatcgaac
ctcaccgaaaaacaacgtctggccctcgaggcagcctaccacggcggctacttcgagtgg
ccgacgcgaaacagcgacgccagcgaaatcgccgaccggctcggcatcgctcgccagacg
ttccaccagcatctccgcgtcgcgcaggcaaaactgctctcggcgtatttcggcgcgagc
gactga
DBGET
integrated database retrieval system
